Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2596g00008 ATGGTTGAAGAAGTCAAGCATCATCACATGGTGAAGGTCATAGATCAGTGTCATGTTAGTCCTCCTTCATCTTCTGTTCCTTCCACCTACATTCCTCTTTCTGTCCTTGACATCCCTTGGCTTTCCTGCACTTTAATGAAATCGATTTTCTTCTATGAGTTCCCTTATTCTACACAGCACTTCCTTCAAACGGTGGTTCCTATTCTCAAACACTCTCTTTCACTCACTCTACAACGCTTCTTCCCCTTCGCTGGTAATGTCGCTTTCACTCCCAAACCCCACACTCCTCACATACTCTACTCCGAAGGTGACTTTGTCTCCTTCACCGTCGCAGAATCCACAGCAGATTTCACCAGACTCGTATCTGATTCCCCAAGAGATGTTAGAGATGCTCATCCACTTGTTCCCGTCCATCCTTCATCACGTACCTTAGAAGATGGCACATTGTTGCTACCAACCATGGCCATTCAGGCCACGGTTTTTGCCAACTCTGGATTCAGCATTTGCCTCACTTTCAGACACGAAATTGCGGATGGTAGAGCTTTTGATCATTTCATGAAATTTTGGGCCACTGTTTGTAGGTCAAAAGGGGACTTCACTTCACTTGAAGGCTCTCTTCCTATGCCGGTCCACAAAAGGGACATCATCGAAGACCCAAAAGGGCTTAAGCCCATTTTCTTGGAGACGAAATGGAATTTGCCACGAGAAATCATAGAAGACACGAGCCTTGTCCATGATGCTCCTAGCGACATGGTGCGCCATAGATTTATATTAAGCCGTAACCAAGTTGATAAACTAAAGAAATGGATCGCTTTCAAAGGTCAGAGTATGGGTGTAGAGACATTGCACTTATCAACTTTCGTTGTGACATGTTCTTTGGTTTGGGTTTGTAAGGTAAAATCAGAAGACAACAAAGTTGATAATGTTGCCAATAATGATGATAATTGCTGCTTGGTTTTTCTAGCAGATTGCCGCAACTTTCCTGAGCTTTCAATTCCATCCACATACTTTGGAAACTGCTTGACCAATGGGATTGCGGAACTTATGAGGAGTAAGCTAGTTGGAGAAAATGGTATTTATGAGGCAGTGAGTGTTATTGGAAACATGGTTAGAGTTCTGCGGGGTGATCCTATGAAAGGGGTTGAAGCGTTTGCGTCAGCAAGGGAAAAAATAGAGTTGAACGTGGAGCGTGTGTTGAAAATCGCAGGATCACCAAAGATGAACATGTATGAGACTGACTTTGGTTGGGGAAAGCCCAAGTTGCATGAAATACTTCATGCAGATGATGGTGCAACAATCTGTCTTTCTGATTGTAGGGATCACAAAGAAGGTGGCGTTGAAGTTGGGGTAGCATTCAAAGGAATTCAAATGAAGAAATTTAATGCCATCTTGGAAGACCAACTTAGAAATATTGCTATTCCTTAA 1425 0.4309 MVEEVKHHHMVKVIDQCHVSPPSSSVPSTYIPLSVLDIPWLSCTLMKSIFFYEFPYSTQHFLQTVVPILKHSLSLTLQRFFPFAGNVAFTPKPHTPHILYSEGDFVSFTVAESTADFTRLVSDSPRDVRDAHPLVPVHPSSRTLEDGTLLLPTMAIQATVFANSGFSICLTFRHEIADGRAFDHFMKFWATVCRSKGDFTSLEGSLPMPVHKRDIIEDPKGLKPIFLETKWNLPREIIEDTSLVHDAPSDMVRHRFILSRNQVDKLKKWIAFKGQSMGVETLHLSTFVVTCSLVWVCKVKSEDNKVDNVANNDDNCCLVFLADCRNFPELSIPSTYFGNCLTNGIAELMRSKLVGENGIYEAVSVIGNMVRVLRGDPMKGVEAFASAREKIELNVERVLKIAGSPKMNMYETDFGWGKPKLHEILHADDGATICLSDCRDHKEGGVEVGVAFKGIQMKKFNAILEDQLRNIAIP 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2596g00008 474 Gene3D - 247 471 IPR023213 -
Gabi2596g00008 474 PANTHER - 11 470 - -
Gabi2596g00008 474 Gene3D - 10 241 IPR023213 -
Gabi2596g00008 474 Pfam Transferase family 12 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2596g00008 Gabi-Chr2596 72711 74135 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2596g00008 48 464 Monolignol Biosynthesis Gene Families AT5G48930 20.930 1.23e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2596g00008 - - gmx:100782335 536.184