Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2596g00005 ATGGCTGAAGAAGTCAAGCATCATCACATGGTGAAGGTCATAGATCAGTGTCATGTTAGTTCTCCTTCATCCTCTGTTCCTTCCACCTCCATTCCTCTTTCTGTCCTTGACATCCCTTGGCTTTCCTGCACTTTAGTGAGATCGATTTTCTTCTATGAGTTCCCTTATTCTACACAGCACTTCCTTCAAACAGTGGTTCCTATTCTCAAACACTCTCTTTCACTCACTCTCCAACGCTTCTTCCCCTTCGCTGCTAATGTCGCTTTCACTCCCAAACCCCACACTCCTCACATACTCTATTCCGAAGGTGACTTTGTCTCCTTCACCGTCGCAGAATCCACAGCAGATTTCACCAGCCTCGTATCTGATTCCCCAAGAGATGTTAGAGATGCTTATCCACTTGTTCCCGTCCATCCTTCATCACGTACCTTAGAAGATGGCACGTTGTTGCTACCAACCATGGCCATTCAGGTCACGGCTTTTGCCAACTCTGGATTCAGCATTTGCCTCACTTTCAGACACGAAATTGCGGATGGTAGAGCTTTTGATCATTTCATGAAATTTTGGGCCACTGTTTGTAGGTCAAAAGGGGACTTCACTTCACTTGAAGGCTCCCTTCCTATGCCGGTCCACAAAAGGGACATCATCGAAGACCCAAAAGGGCTTAAGCCCATTTTCTTGGAGACGAAGTGGAATTTGCCACGAGAAAGCATAGAACACACGAGCCTTTTCCATGATGCTCCTAGCGACATGGTGCGCCATAGATTTATATTAAGCCGTAACCAAGTTGAGAAACTAAAGAAGTGGATCGCTTTCAAAGGTCAAAGTATGGGTGTAGAGACATTGCACTTATCAACTTTCGTTGTGACATGTTCTTTGGTTTGGTTTTGTAAGGTAAAATCAGAAGACAACAAAGTTGATAATGTTGCCAATAATGATGATAGCTGCTGCTTGGCTTTTCTAGCAGATTGCCGTAACTTTCCTGAGCTTTCAATTCCATCCACATACTTTGGAAACTGCTTGACCAGTGGGATTGCGGCACTTATGAGGAGTAAGCTAATTGGAGAAAATGGTATTTATGAGGCAGTGAGTGTTATTGGAAACACGGTTAGAGTTCTGCAGGGTGATCCTATGAAAGGGCTTGAAGCGTTTGCGTCAGCTAGGGAAAAAGTAGCGTTGAGCGTGGAGCGTGTGTTGAAAATCGCAGGATCACCAAAGATTTATGCGTATGAGACTGACTTTGGATGGGGAAAACCCAAGTTATATGAAATGCTTCATGCAGATGATGGAGCAACAATCTGTCTTTCTGATTGTAGGGACGAAGAAGGTGGCGTTGAAGTTGGGGTAGCATTCAAAGGAATTCAAATGAAGAAATTTAATGCCATCTTGGAAGACCAACTTAGAGATATTGCTATTCCTGATTAA 1425 0.4393 MAEEVKHHHMVKVIDQCHVSSPSSSVPSTSIPLSVLDIPWLSCTLVRSIFFYEFPYSTQHFLQTVVPILKHSLSLTLQRFFPFAANVAFTPKPHTPHILYSEGDFVSFTVAESTADFTSLVSDSPRDVRDAYPLVPVHPSSRTLEDGTLLLPTMAIQVTAFANSGFSICLTFRHEIADGRAFDHFMKFWATVCRSKGDFTSLEGSLPMPVHKRDIIEDPKGLKPIFLETKWNLPRESIEHTSLFHDAPSDMVRHRFILSRNQVEKLKKWIAFKGQSMGVETLHLSTFVVTCSLVWFCKVKSEDNKVDNVANNDDSCCLAFLADCRNFPELSIPSTYFGNCLTSGIAALMRSKLIGENGIYEAVSVIGNTVRVLQGDPMKGLEAFASAREKVALSVERVLKIAGSPKIYAYETDFGWGKPKLYEMLHADDGATICLSDCRDEEGGVEVGVAFKGIQMKKFNAILEDQLRDIAIPD 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2596g00005 474 Gene3D - 10 241 IPR023213 -
Gabi2596g00005 474 Pfam Transferase family 21 461 - -
Gabi2596g00005 474 PANTHER - 11 469 - -
Gabi2596g00005 474 Gene3D - 247 470 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2596g00005 Gabi-Chr2596 21342 22766 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2596g00005 27 463 Monolignol Biosynthesis Gene Families AT5G48930 21.957 1.84e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2596g00005 - - gmx:100782335 546.584