Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2591g00006 ATGGATAACCCGTTTCTTCTTCCACTTGATCCAAACAATGCTCAAATTCCTGCTTCCCTGTCAACCATTACTTCGGAAGAATACTCTGATCTCTTGGATGAGACTGATTTCTCTGCTACCGTCCTACGCTACATAAACCAAATGCTTATGGAAGAGGACCTGGACGAGAAGGCCTGCATGTTTCATGATTCTTTGGCTCTTCAAGCTGCTGAGAAATCATTATATGAGGTCATTGATGAGGCATACCCTTCTTCTTCAGTCCAAGTGGAGAGCCCTGATGACAGTCTCTGTAGTAACTTCATCGATTTTAGCAGTTGCAGTACCACTAGCACTAGCAACTCCTTTGAGTCCCACTGGAGTAACGTTGATCTTACTGAGTACAAGTCTTCTTTACTTCAAACCAATTTTCCTTCTGACTTTGTTTTCCAGGCGAGTTCGACATATCGTACACAATCTTCTATGAATAGCACTAGTAGCTTCACTGTAAACAATATTGGATTCTTGGAAAGTTCCAGGGCTGGATTTTTAGATCCAAACTTGCTTAGCAAGAGTGAATTTCTACTGCAATTTGAGAAAGGTTTGGAGGAAGCCGGTAAGTTTCTGCCTAAAGGGAATCCATTGGTTATTGACCTGGAGAACACCACTTTTAGCCCTTCTTTTAGAAAGTCTCATCAGCAGGTTGTAATTGAGACAGAGAGAGATAAATGGGAGCATTTTTCATCTGAGTCAAGAGGAAGGAAGAATCATGAACGGGAGGATGAAACAGATTTACAAGATGGGAGAAGCAACAAGCACTCAGCTGTTTGCATGGATGAAAATGAGTTATCAGAATTATTTGATAAGGCACTGCTAGGCCGGACTCCTGCGAGTGATTATAAAAAAGGCCAGCCTAATGGACCAGACATGAGCACGCAGCAGAAAGAAGAAAAAAACAAGTCTGGTAGCGGAAAGAGCCATGTTAAGAAACAAGACAATAATAAGAAGGGAGTTGTGGATCTGAGGACACTATTGATTGTATGTGCACAAGCTGTTTCTTCTGATGATCGTGCAACTGCTAATGAGATATTGAAGCAGATAAGGCAACATTCTTCCCGGCTGGGTGATGGGTCTCAGAGACTGGCCCATTGCTTTGCAAATGCTCTTGAAGCACGCTTGGCTGGCACTGGCACTCAGATTTATACTGCTTTATCCTCCAAAAGAACCTCTGCTGCAGATATGGTGAAAGCTTACCAAATGTATATTTCAGTCTGCCCATTTCAGAAGCTTGCAATAATTTTTACAAACCATACAATTTTGAGTCTTGTCAAGGAAGTGGAAACTCTTCATATTGTAGATTTTGGCATCCGTTATGGCTTCCATTGGCCTTCACTTATTTATCGTCTATCACAACGACCTGGTGGACCTCCCAAGCTGCGCATGACAGGGATAGAGCTCCCTCAACCTGGTTTCAGGCCAGCAGAGAGACTCCAGGAGACAGGGCTACGCCTGGCAAGGTATTGTGATCGATTTAATGTTCCATTTGAGTTCAATGCTATTGCACAGAAATGGGAAACCATCAAAATTGAGGACTTGAAGATAAAGGAAAATGAACTTGTTGCGGTGAATTGTATGGTTCGATTTAAGAATCTACTTGATGAAACTGTTGTGTTGAATAGTCCCAAGGATGTTGTTTTGAATTTAATTAGGAAGGCAAATCCCACTATCTTTATACATACTACGATGAATGGGAGCTATAATGTCCCATTCTTTGTGACACGGTTCCGGGAGGCTCTTTTTCATTACTTTTCATTGTTTGATGTGCTTGACACCAATGTTGCTCGCGAAGATCCCGTAAGGTTGATGTTTGAGGAGGAGTTCTTCGGGAGGGAGGTAATGAATGTTATAGCTTGTGAGGGCTCTAAGAGGGTTGAGAGGCCCGAGACATACAAGCAATGGCAAGGTAGGAACACGAGGGCAGGGTTTAGGCAACTTCCTTTGGATCAAGAGCTCATGAACATATTAAGAGGCAGGTTGAGAGAAGTGTACCACAGTGATTTCATGCTAGATGAAGATGGCAACTGCTTGCTGCAAGGTTGGAAGGGCCGAATTATTTATGCTTCCTCCTGTTGGGTACCAGCATAG 2121 0.4286 MDNPFLLPLDPNNAQIPASLSTITSEEYSDLLDETDFSATVLRYINQMLMEEDLDEKACMFHDSLALQAAEKSLYEVIDEAYPSSSVQVESPDDSLCSNFIDFSSCSTTSTSNSFESHWSNVDLTEYKSSLLQTNFPSDFVFQASSTYRTQSSMNSTSSFTVNNIGFLESSRAGFLDPNLLSKSEFLLQFEKGLEEAGKFLPKGNPLVIDLENTTFSPSFRKSHQQVVIETERDKWEHFSSESRGRKNHEREDETDLQDGRSNKHSAVCMDENELSELFDKALLGRTPASDYKKGQPNGPDMSTQQKEEKNKSGSGKSHVKKQDNNKKGVVDLRTLLIVCAQAVSSDDRATANEILKQIRQHSSRLGDGSQRLAHCFANALEARLAGTGTQIYTALSSKRTSAADMVKAYQMYISVCPFQKLAIIFTNHTILSLVKEVETLHIVDFGIRYGFHWPSLIYRLSQRPGGPPKLRMTGIELPQPGFRPAERLQETGLRLARYCDRFNVPFEFNAIAQKWETIKIEDLKIKENELVAVNCMVRFKNLLDETVVLNSPKDVVLNLIRKANPTIFIHTTMNGSYNVPFFVTRFREALFHYFSLFDVLDTNVAREDPVRLMFEEEFFGREVMNVIACEGSKRVERPETYKQWQGRNTRAGFRQLPLDQELMNILRGRLREVYHSDFMLDEDGNCLLQGWKGRIIYASSCWVPA 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2591g00006 706 ProSiteProfiles GRAS family profile. 324 704 IPR005202 -
Gabi2591g00006 706 Pfam GRAS domain family 333 703 IPR005202 -
Gabi2591g00006 706 MobiDBLite consensus disorder prediction 234 264 - -
Gabi2591g00006 706 MobiDBLite consensus disorder prediction 305 326 - -
Gabi2591g00006 706 MobiDBLite consensus disorder prediction 288 326 - -
Gabi2591g00006 706 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 259 697 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2591g00006 Gabi-Chr2591 91232 93410 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2591g00006 41 706 GRAS Transcription Factor Family AT1G07530 54.690 0.0 724
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi2591g00006 GRAS 2.2e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2591g00006 - - ahf:112736647 1034.63