Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi258g00003 ATGGGGAGGAAGAACAAGATTGAAGATGATTATGTTACTGGGGTGAGGATCGGGCAAGGAAAGTATGGATCTGTTTCGTTGTGTAGGTCTCTTGTTGGCGGCGCGGAGTATGCGTGTAAGACTCTGAAGAAGGGGGATGAGACTGTTTACAGGGAGGTGGAGATAATGCAGCACTTGTCTGGGCATCCTGGGGTTGTGACTCTGCTGGCAGTGTATGAGGAAGCTGATTGCTCTCATCTGGTGATGGAATTGTGCTCTGGGGGAAGACTTGTCGACCAGATGTTTAGGGAGGGCCCTTGTTCTGAACAGCGGGCTGCTAATATACTTAAGGAAGTGATGTTGGTCATCAAGTATTGTCATGATATGGGAGTTGTGCACAGAGATATCAAGCCTGAGAATATTCTGCTTACTGCTTCGGGGGAAATAAAGCTTGCTGATTTTGGCCTGGCCATGAGAATTTCTAAGGGTAATATGTTAAACCTGTTTGGATGA 492 0.4695 MGRKNKIEDDYVTGVRIGQGKYGSVSLCRSLVGGAEYACKTLKKGDETVYREVEIMQHLSGHPGVVTLLAVYEEADCSHLVMELCSGGRLVDQMFREGPCSEQRAANILKEVMLVIKYCHDMGVVHRDIKPENILLTASGEIKLADFGLAMRISKGNMLNLFG 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi258g00003 163 ProSiteProfiles Protein kinase domain profile. 11 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi258g00003 163 Pfam Protein kinase domain 11 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi258g00003 163 Gene3D Transferase(Phosphotransferase) domain 1 3 162 - -
Gabi258g00003 163 SMART serkin_6 11 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi258g00003 163 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Gabi258g00003 163 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 151 - -
Gabi258g00003 163 SUPERFAMILY Protein kinase-like (PK-like) 8 157 IPR011009 -
Gabi258g00003 163 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi258g00003 Gabi-Chr258 14666 15157 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi258g00003 1 160 EF-hand Containing Proteins AT2G38910 40.351 7.10e-40 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gabi258g00003 Pkinase 6.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi258g00003 - - pcin:129303422 277.33