Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2588g00005 ATGAAGTTACCAAGTCCTGCCCTTTTCTTTCTCCTCCAAATTCTTCTTCTCTCTCTACTCCACAGACCTAGCTTTGCAGTGAAAAAGTCATATGTTGTGTACTTAGGAGCACATTCACATGACCCAGAATTGTCTTCAATTGATTTCAATCTCGTGACACAGTCACATTATGAGTTTCTAGGATCTTTCTTGGGAAGTTCTAATACAGCCAAAGATTCCATCTTTTACTCCTACACAAGGCATATCAATGGTTTTGCTGCAACTTTAGAGGAAGAAGTTGCAGCTGAGATAGCAAAGCATCCCAAAGTGTTGTCAGTGTTCGTGAACAGTGGGAGAAAACTACACACAACTCGGTCATGGGAATTCATGGGGCTAGACAATAATGGGGTGATCCCATCTAGCTCAATCTGGAGAAAAGCTAGATTTGGTGAAGGTGTGATTATAGGAAACCTCGATACAGGAGTTTGGCCTGAATCCAAGAGCTTTAGTGATGAAGGGTTGGGACCAATTCCATCAAAGTGGAGAGGAATCTGTGATAACGGAACTGATCCTGGTTTTCACTGCAACAGGAAGCTAATTGGGGCAAGGTATTTCAACAAGGGCTATGCTTCTATTGCTGGCCCACTCAACTCTTCATTTGACTCACCGCGTGACAACGATGGGCATGGATCCCACACTCTATCAACTGCTGGTGGTAACATGGTAAGTGGGGTCAGTGTCTTTGGTCAAGGAAATGGAACAGCAAAGGGTGGGTCCCCTAAAGCCAGGGTGGCATCTTATAAGGTTTGCTGGCCCCCTATTGGTGTTGATGAATGCTTTGAAGCTGATATACTAGCAGGTTTTGATATGGCCATCCATGATGGTGTTGATGTTTTGTCTGTGTCATTGGGTGGCTCTTCCTCTACCCTTTTTAAAGATAGTATTGCCATTGGATCCTTCCATGCTGCTAAGCATGGCATTGTTGTGGTTTGTTCTGTTGGCAATAGTGGACCTGCTGATGCTTCTGCAGCGAATCTTGCTCCATGGTATATCACAGTTGGTGCCAGCACAATGGATAGAGAGTTCCCTAGTTATGTTGTCCTTGGTAACAAGATAAGCTTGAAGGGAGAAAGCTTGTCAGCTGCAAGATTGGCACACAAGTCCTACCCAATTATTAAAGCTACAGATGCTAAATTGGCCAGTGCAACAGCTCAAGATGCTGTGCTGTGCCAGAATGGAACTCTGGATCCCAAAAAGGTGAAGGGAAAGATTGTAGTATGCCTCAGAGGGATAAATGCAAGAGTGGACAAAGGAGAGCAAGCTTTGCTAGCTGGTGCTGCAGGAATGGTTCTTGCCAATGATGTGACCAATGGGAATGAAATTTTAGCTGATCCTCATGTCCTTCCAGCTTCTCAGATCAATTTCACTGATGGTGTTGCTCTCTATAAGTACATCAACTCAACTAAGTACCCTATGGCTTATATTACACATCCAAAGACACTATTGCATACTAAGCCAGCCCCCTTCATGGCAGCGTTTTCATCAAAAGGACCAAATACTATTGTACCAGAGATCCTAAAGCCTGATATCACTGCCCCAGGAGTGTCAGTTATAGCGGCCTACACAGAAGCTGAAGGGCCAACTAATCAATATTTCGACAAGCGTAGGATTCCATTTAACTCAATCTCAGGCACATCAATGTCATGCCCTCATATTTCAGGAATTGTGGGCCTTTTGAAAACTCTATATCCTTCGTGGAGTCCTGCTGCTATTAAATCAGCAATCATGACCACAGCTACAACACTAGATAATGAGTCAGAGACCCTGCTGAATGCTACTAATGGCCAAGCAACACCATTTAGTTATGGGGCAGGACATGTTCAACCAAATAGAGCAATGGATCCTGGCCTAGTTTATGACACAACAATTGATGATTACCTAAACTTCTTATGTGCTTTAGGTTACAATGCAACACTAATATCAGTGTTTTCAGATAGTCCTTATCCATGCCACAAGAACTTTAGTCTCCTCAACCTAAACTATCCTTCAATCACAGTCCCAAATCTATCTGGGTCAGTCAAAGTAAAAAGGACATTAAAAAATGTTGGTTCTCCTGCAACATACATTGCTCATGTTCAAAACCCAAGTGGAATCACCATTTCTGTGGAGCCAAACATCTTGAAGTTCAAAAAAGTTGGTGAAGAAAAGAGATTTGAAGTAACCTTGAAGGTTAATAAAGGAAAAGCATCAAATAACTATGTGTTTGGAAAGCTGATATGGTCAGATGGCAAGCATTATGTTAGGAGTCCAATTGTGGTGAAGACCCTCTAG 2310 0.4281 MKLPSPALFFLLQILLLSLLHRPSFAVKKSYVVYLGAHSHDPELSSIDFNLVTQSHYEFLGSFLGSSNTAKDSIFYSYTRHINGFAATLEEEVAAEIAKHPKVLSVFVNSGRKLHTTRSWEFMGLDNNGVIPSSSIWRKARFGEGVIIGNLDTGVWPESKSFSDEGLGPIPSKWRGICDNGTDPGFHCNRKLIGARYFNKGYASIAGPLNSSFDSPRDNDGHGSHTLSTAGGNMVSGVSVFGQGNGTAKGGSPKARVASYKVCWPPIGVDECFEADILAGFDMAIHDGVDVLSVSLGGSSSTLFKDSIAIGSFHAAKHGIVVVCSVGNSGPADASAANLAPWYITVGASTMDREFPSYVVLGNKISLKGESLSAARLAHKSYPIIKATDAKLASATAQDAVLCQNGTLDPKKVKGKIVVCLRGINARVDKGEQALLAGAAGMVLANDVTNGNEILADPHVLPASQINFTDGVALYKYINSTKYPMAYITHPKTLLHTKPAPFMAAFSSKGPNTIVPEILKPDITAPGVSVIAAYTEAEGPTNQYFDKRRIPFNSISGTSMSCPHISGIVGLLKTLYPSWSPAAIKSAIMTTATTLDNESETLLNATNGQATPFSYGAGHVQPNRAMDPGLVYDTTIDDYLNFLCALGYNATLISVFSDSPYPCHKNFSLLNLNYPSITVPNLSGSVKVKRTLKNVGSPATYIAHVQNPSGITISVEPNILKFKKVGEEKRFEVTLKVNKGKASNNYVFGKLIWSDGKHYVRSPIVVKTL 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2588g00005 769 SUPERFAMILY PA domain 399 483 IPR046450 -
Gabi2588g00005 769 Gene3D - 643 769 - -
Gabi2588g00005 769 SUPERFAMILY Subtilisin-like 114 630 IPR036852 GO:0004252|GO:0006508
Gabi2588g00005 769 Gene3D - 352 495 - -
Gabi2588g00005 769 ProSiteProfiles Serine proteases, subtilase domain profile. 119 626 - -
Gabi2588g00005 769 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 68 766 IPR045051 -
Gabi2588g00005 769 FunFam Subtilisin-like protease SBT1.5 145 403 - -
Gabi2588g00005 769 Pfam Fibronectin type-III domain 671 766 IPR041469 -
Gabi2588g00005 769 FunFam subtilisin-like protease SBT1.5 352 495 - -
Gabi2588g00005 769 ProSitePatterns Serine proteases, subtilase family, serine active site. 557 567 IPR023828 -
Gabi2588g00005 769 CDD Peptidases_S8_3 113 593 IPR034197 -
Gabi2588g00005 769 FunFam Subtilisin-like protease SBT1.5 643 769 - -
Gabi2588g00005 769 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Gabi2588g00005 769 PRINTS Subtilisin serine protease family (S8) signature 556 572 IPR015500 -
Gabi2588g00005 769 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Gabi2588g00005 769 Pfam Subtilase family 143 617 IPR000209 GO:0006508|GO:0008236
Gabi2588g00005 769 Pfam Peptidase inhibitor I9 30 115 IPR010259 -
Gabi2588g00005 769 Pfam PA domain 403 474 IPR003137 -
Gabi2588g00005 769 CDD PA_subtilisin_like 358 488 - -
Gabi2588g00005 769 Gene3D Peptidase S8/S53 domain 145 639 IPR036852 GO:0004252|GO:0006508
Gabi2588g00005 769 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 115 IPR037045 -
Gabi2588g00005 769 FunFam Subtilisin-like protease SBT5.3 20 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2588g00005 Gabi-Chr2588 55617 66178 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2588g00005 30 767 Subtilisin-like Serine Gene Family AT2G04160 66.127 0.0 1009
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2588g00005 - - gmx:100794807 1310.05