Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi257g00007 ATGAGCAGCTTAAGGCCTGAATTGCATGTTGCACAACAAATTCGGCGCGACAAATTAAGGATCCATAACAGTTCCCAGCATTTGCAAGAGTTCCCGAACTTTCAAGTTAGGAACATTAGAAATGGCAACATGCTTGATGAGGCATCTCTTTATTCATCGGAAATGATAAGTTTTTCAACGGATTCGAATCCTTTATCTGCTCCTAGAAACACGTTGGAGTTTAGTCAGGAACTAGGTTCTTCATCCGAACCAAGTAGGCTAATGATGCCTCCTCACTATGGTAATTCATTTCCCCATCCATCTTCCCCAAAAGAACAATGCCAACAGCGTAACTTTGATTGGATGATGAATTATCAAAACGAAAGAAATCCCAACTCTTTCATGGATGCTGAGCTCAATAATAATGTGTCTTCTACTCACACTTTCTATGGGAAGCCTAGTTCTAATGTGCTTACTGTTGCAAAGTCTTCTCCAAGCCCAGAAATTCATAAGCAACTAGGGGAAATGCATTATCCTTCTTCTTCTTCTTCTTCACCTTCACTTTATCATAATGCTTTGCAGGATATTTTCAAATCAGCTTCTAATATTGTCCACGGTTCAGAAATTCCTTCCCTGATGCAGCATCAAACTGGTCATGGAACTTGGGGTGGGAATCATAGTGAGCTTGTGCTTCATCCAAGCTATGTAAATCAAGCAAATGATCAATTGCATATTGACAATACCCTTCGTTGGAATGATCAACAAGTGAGGGATTGCAATCCTCAGGGTCTATCCTTATCACTTTCTTCAAATTCACAATCCAAGATTTCTGGTTCTCATTTTGAAGAGGGGTCTGCATGTGATGATCTTCAATCTTCTAAGTTTGTGAAATCTATCATGAAGCCGTCTATGATTTCTAGAGATTGTGGGAAATCACTTGAAGACCCGATTGGAATGGTTGTAAACACTAGTAGTTATCGAAATCTTGGTCCCCTTGGTCCTTTCACTGGATACGCTCTAATTCTGAAGAGTTCAAGGTTCTTGAAGCCTTGCCAACAGCTGTTAGATGAATGCTGTTGTCAATCTAGTCCTAAACTTGTGAAAGCTTGTGATATTCCAAAATGGATCTCTCGAGAAGTTGGTGCTTCTACTTCTGCTGGTGCTGTTAATGTTGATGAAAGTGGGGTTGCTGCAAAAGTTAGTAATTCAGGTCTTTCTTCATGTTCAATGTTCTATAGTTCAAATGAAAATAACGCTGATGGTGGAGCCTCGAGTAGCTTTTGTCTTTCTTCTCGGCCAGAATGCCAAAAGAATAAGGCAAAACTCCTGTTCATGCAAGAAGAGGTTACCAGGGGATACAAGCAATACCATCAACAAATGCAAATGGTTGTTTCATCCTTTGATTCAGTGGCGGGTCTTAGTTCTGCTACCCCTTATATCTCCATGGCTCTCAAGTCAGTATCAAGACACTTCAAATGCTTAAAAAATGCTATCTCAGATCAACTCAAGTTTGTATGTGAAGTTTTGGGAGAGGACTTTTCAATACCAACAACCACAAGTACTAATAGTAAATTTGACAATTATATGACAAGGCTAAGGTGCATGGACCCAAGTTTTCAGAAGAACAAATCTGGTGGGGGTAACATAGACTTTCTTGAACCCCAACAACATGTGTGGAGGCCCCAAAGAGGCTTACCAGAACGCTCTGTTGCAATTCTAAAAGCCTGGTTATTTGAGCATTTTCTTCATCCGTACCCCACGGATACTGATAAACACATGTTGGCTACTCAAACGGGTCTATCACGAAATCAGGTATCAAATTGGTTCATAAATGCTCGAGTTCGTGTGTGGAAGCCAATGGTTGAGGAAATACACATGCTTGAAACAAAAGGCATAACGGGTGCCCACAAGAACTCTAATAATTATGAGGGAACTTCTGCCTCTGAAGGTAGCAAGTTTGGTACGCATGCAATCCCTGAAAAGCAATTTCAGTGTTTGGAAATGGGGTCATCCTCAGCTTGCAATGAGGAAAATGGAATAGATGAAGAACAATGGAATCAAGAGAAGCGGTCTAAATTGGAATGTCATATAACATCAAGCATGGATGGGACAATGATGGGTTTTATGCCATACAGACATGGTGGATTTGAGGTTGGGGGACTTGGATCTGTGTCACTAACTTTGGGTCTTAGGCATGGTGTTGAAGGTGTGCAACACAAGCAACAGGAGGAGGAGCTTAGACCTAACTTTGGAGGGCACATGATCCATGATTTTGTCGGCTGA 2262 0.4107 MSSLRPELHVAQQIRRDKLRIHNSSQHLQEFPNFQVRNIRNGNMLDEASLYSSEMISFSTDSNPLSAPRNTLEFSQELGSSSEPSRLMMPPHYGNSFPHPSSPKEQCQQRNFDWMMNYQNERNPNSFMDAELNNNVSSTHTFYGKPSSNVLTVAKSSPSPEIHKQLGEMHYPSSSSSSPSLYHNALQDIFKSASNIVHGSEIPSLMQHQTGHGTWGGNHSELVLHPSYVNQANDQLHIDNTLRWNDQQVRDCNPQGLSLSLSSNSQSKISGSHFEEGSACDDLQSSKFVKSIMKPSMISRDCGKSLEDPIGMVVNTSSYRNLGPLGPFTGYALILKSSRFLKPCQQLLDECCCQSSPKLVKACDIPKWISREVGASTSAGAVNVDESGVAAKVSNSGLSSCSMFYSSNENNADGGASSSFCLSSRPECQKNKAKLLFMQEEVTRGYKQYHQQMQMVVSSFDSVAGLSSATPYISMALKSVSRHFKCLKNAISDQLKFVCEVLGEDFSIPTTTSTNSKFDNYMTRLRCMDPSFQKNKSGGGNIDFLEPQQHVWRPQRGLPERSVAILKAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEIHMLETKGITGAHKNSNNYEGTSASEGSKFGTHAIPEKQFQCLEMGSSSACNEENGIDEEQWNQEKRSKLECHITSSMDGTMMGFMPYRHGGFEVGGLGSVSLTLGLRHGVEGVQHKQQEEELRPNFGGHMIHDFVG 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi257g00007 753 MobiDBLite consensus disorder prediction 75 106 - -
Gabi257g00007 753 SUPERFAMILY Homeodomain-like 554 618 IPR009057 -
Gabi257g00007 753 ProSiteProfiles 'Homeobox' domain profile. 549 612 IPR001356 GO:0003677
Gabi257g00007 753 SMART prehox3 329 493 IPR006563 -
Gabi257g00007 753 Gene3D - 555 617 - -
Gabi257g00007 753 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 178 636 - -
Gabi257g00007 753 FunFam BEL1-like homeodomain protein 9 555 617 - -
Gabi257g00007 753 Pfam Associated with HOX 334 492 IPR006563 -
Gabi257g00007 753 CDD homeodomain 552 613 IPR001356 GO:0003677
Gabi257g00007 753 Pfam Homeobox KN domain 569 608 IPR008422 GO:0003677|GO:0006355
Gabi257g00007 753 SMART HOX_1 552 616 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi257g00007 Gabi-Chr257 92772 98269 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi257g00007 423 725 Homeobox Transcription Factor Family AT4G34610 44.262 1.97e-66 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Gabi257g00007 POX 2.5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi257g00007 - - vum:124831694 873.233