Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2577g00001 ATGAAGGTTTTGTATGTTAGGGATCACATTTATGGAGATATACTATGCAGCAAAAAGATCAAGAGGGAGATTTCCATTATGAAGCTAGTCAGGCATCCTTATGTTGTTCGCCTGCATGAGATACACCTTGGGCGTCTTAGTGAAGCTGAATCTAGAAGATATTTCCAACAGCTTATTGATGGTGTAGATTACTGCTACAGTAAGGGAGTTTATCACAGAGATTTAAAGTGTTTTGGTGATGCTACATTGGCTCCATAG 258 0.3915 MKVLYVRDHIYGDILCSKKIKREISIMKLVRHPYVVRLHEIHLGRLSEAESRRYFQQLIDGVDYCYSKGVYHRDLKCFGDATLAP 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2577g00001 85 Gene3D Phosphorylase Kinase; domain 1 2 41 - -
Gabi2577g00001 85 Gene3D Transferase(Phosphotransferase) domain 1 42 78 - -
Gabi2577g00001 85 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 19 76 - -
Gabi2577g00001 85 SUPERFAMILY Protein kinase-like (PK-like) 2 77 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2577g00001 Gabi-Chr2577 7623 10961 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2577g00001 19 76 CBL-interacting serine-threonine protein kinases AT4G24400 57.317 1.46e-22 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gabi2577g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2577g00001 - - itr:116023723 102.449