Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2574g00095 ATGGGAGTGTTCACATTCGTCCTCCGCAGCTCCGGTGGCGAATGGACCGCAAAGCAATTCTCCGGCGACATCGAGGCCTCTGCTGACTCCTCCTTCGAGCTCCAACGGAAGCTCGTTCAAGCCGCTCTCGCCGTTGACTCCTTCGGTTCCGTGCAGTCTTCTTACTCTACTGTGTCTCCTTCTTCTGCTGTCTTCCAGGTGATTGTGGGTGGTGCAGTGTTCGTTGGAGGTGGTGTTGGTGCTGCAGCTGCTCCCGCAGGAGGTGCAGCCCCGGCTGCGGATGCTGCCCCGGCTCCTGAGAAAAAGGAAGAAAAGGTTGAGGAAGAGGAGGAGGATGATGATATGGGATTGTCACTCTTTGATTAG 366 0.5656 MGVFTFVLRSSGGEWTAKQFSGDIEASADSSFELQRKLVQAALAVDSFGSVQSSYSTVSPSSAVFQVIVGGAVFVGGGVGAAAAPAGGAAPAADAAPAPEKKEEKVEEEEEDDDMGLSLFD 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2574g00095 121 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 121 IPR044252 GO:0003735|GO:0005840
Gabi2574g00095 121 MobiDBLite consensus disorder prediction 105 121 - -
Gabi2574g00095 121 Pfam 60s Acidic ribosomal protein 68 120 - -
Gabi2574g00095 121 MobiDBLite consensus disorder prediction 83 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2574g00095 Gabi-Chr2574 883099 884452 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2574g00095 1 68 Cytoplasmic Ribosomal Protein Gene Family AT5G57290 70.588 9.67e-28 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2574g00095 K02942 - qsa:O6P43_022346 110.538