Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2574g00058 ATGTTAGAGAGTGGTGCACGTGATTCTGAGGTGAGTTTGGACACTGTGAATTCGACGCAGCGAAGCTCCATGAGCAGTGAAAGCATTTGCAGCACGAGTTTCAGCCGTCTTTCATTCGACCTCCTCCCCGCCTCGCCGGAGAGTCTCTCAGTCAAGCCTCACCGCTCCTCCGACTTCGCCTACTCCGCCATCTGCTCCGCCACATTCCGCCGCAAGGCCGCCCTCACCTTCCGCGACTTTCAGCTCCTCCGCCGAATCGGCGCCGGCGATATCGGTACCGTCTACCTCTGCCGCCTCCGCAACACCAGAAACGAATTCGACAACGAAGAAGAAGAAGACTCGTGCTGTTTGTACGCCATGAAAGTGGTGGACAAAGACGCCGTGGCATTGAAGAAGAAGGCACAGAGAGCGGAAATGGAGAGAAAGATCCTCAAGATGCTCGACCACCCTTTCCTCCCTACGCTCTACGCTGAGTTCGAGGCCTCACATTTCTCTTGCATTGTCATGGAGTTTTGTTCCGGTGGAGACTTGCACTCCCTACGCCACAAGCACCCTCACAACCGTTTTCCTCTCTCCTCAGCAAGATTTTATGCGGCTGAGGTACTGGTGGCGTTGGAGTACCTCCACATGTTGGGAATCATCTACAGGGATCTAAAACCTGAGAACGTGTTGGTCAGATCTGACGGTCACATCATGCTTTCTGATTTCGATCTTTCTCTTTGCTCAGATGCAATCCCTGCCGTTGAATCCTCTGATTGCTTACAAGATCCTGCGATTCCATCTGCATTACCTTACAATCGCTCGCGTTCTTTTTCTACTCCATTCTCGTGCTTCTCGAACCGGGTGTTCCGGTCCCGCAAGGTCCAAACGGTTCAGCCGAACCGGCTTTTCGTGGCCGAACCGGTTGCTGCCCGGTCCCACTCCTTTGTTGGAACCCACGAGTATGTATCGCCGGAGGTCGCTGCCGGCAACTCACACGGAAACGCCGTTGATTGGTGGTCCTTTGGCATATTTATCTACGAGCTCATCTACGGTCGTACGCCGTATGCGGCCCCATCGAACGAGGCTACGCTGCGCAACATCATAAAGAAGCCCCTGACCTTTCCCACGTCCACGCCCTCCAGCGCGCTTGAACTCCACGCGCGGGACCTGATATCCCGCTTGTTGAACAAGGATCCAGCTCGACGGCTTGGGTCGAAGCGCGGCGCCGCTGACGTCAAGAAGCACCCCTTCTTCAAAGGGCTTAACATGGCGCTGATTCGCATGCTGACGCCGCCCGAAGTGCCGGGCTCGAGAAAGACAAAAACGACGTCGTCGCACCATGCTAAGGGTAGTAGTAGACAGAAATCCACGTCATCGTTTGATTATTACTTTTGA 1377 0.5461 MLESGARDSEVSLDTVNSTQRSSMSSESICSTSFSRLSFDLLPASPESLSVKPHRSSDFAYSAICSATFRRKAALTFRDFQLLRRIGAGDIGTVYLCRLRNTRNEFDNEEEEDSCCLYAMKVVDKDAVALKKKAQRAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRHKHPHNRFPLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIPAVESSDCLQDPAIPSALPYNRSRSFSTPFSCFSNRVFRSRKVQTVQPNRLFVAEPVAARSHSFVGTHEYVSPEVAAGNSHGNAVDWWSFGIFIYELIYGRTPYAAPSNEATLRNIIKKPLTFPTSTPSSALELHARDLISRLLNKDPARRLGSKRGAADVKKHPFFKGLNMALIRMLTPPEVPGSRKTKTTSSHHAKGSSRQKSTSSFDYYF 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2574g00058 458 ProSiteProfiles Protein kinase domain profile. 80 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2574g00058 458 CDD STKc_phototropin_like 78 429 - -
Gabi2574g00058 458 SUPERFAMILY Protein kinase-like (PK-like) 61 431 IPR011009 -
Gabi2574g00058 458 SMART serkin_6 80 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2574g00058 458 FunFam protein kinase PINOID 172 240 - -
Gabi2574g00058 458 Gene3D Transferase(Phosphotransferase) domain 1 305 430 - -
Gabi2574g00058 458 MobiDBLite consensus disorder prediction 443 458 - -
Gabi2574g00058 458 Pfam Protein kinase domain 306 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2574g00058 458 Pfam Protein kinase domain 81 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2574g00058 458 Gene3D Phosphorylase Kinase; domain 1 78 171 - -
Gabi2574g00058 458 Coils Coil 120 147 - -
Gabi2574g00058 458 PANTHER FLIPPASE KINASE 1-RELATED 18 437 - -
Gabi2574g00058 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Gabi2574g00058 458 MobiDBLite consensus disorder prediction 426 458 - -
Gabi2574g00058 458 FunFam serine/threonine-protein kinase D6PK-like 304 430 - -
Gabi2574g00058 458 Gene3D Transferase(Phosphotransferase) domain 1 172 239 - -
Gabi2574g00058 458 FunFam protein kinase PINOID 2 78 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2574g00058 Gabi-Chr2574 615944 617446 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2574g00058 8 457 AGC Kinase Gene Family AT2G34650 66.740 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gabi2574g00058 Pkinase 4.1e-32 CL0016