Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2574g00049 ATGTCTAAAACAGATGATGGTGCTTGCCTCTCTGCAATGTTACTCACTACTAATCTGGTATATCCTGCGGTTCTCAATGCTGCTATTGACCTCAACTTGTTTGAGATCATAGCTAAGGGAACCCCACATGGTGCCTTCATGTCACCCTTTGAAATTGCTTCTAAGCTTCCAACCCAACACTCTGACTTGCCTAATAGGCTTGATCGCATGCTGCGTTTGCTTGCCAGTTACTCTCTTCTTACTTGTTCAACTCGCACCACTGAGTATGGTACCACTGAGAGAGTTTATGGGCTCTCACAAGTTGGAAAATACTTAGTCTCTGATGAAAGTAGGGGCTACTTAGCTTCATTCACAACATTTCTTTGTTATCCAGCGCTGTTACAGGTTTGGCTGAACTTCAAGGAAGCGGTGGTTGATGCAGACATTGACCTATTCAAGAAACTTCATGGAATAACCAAGTACCAGTACATGGAAAAGGACCCAACAATGAACCACATTTTTAACAAGTCAATGGCCGATGTGTGTGCAACAGAGATGAAAAGAATGCTCGAAATATATGCTGGATTTGAGGGAATATCAACATTGGTTGACGTAGGAGGAGGAAATGGACAAAATCTCAAAATGATAATCTCAAAGTACCCTTTAATAAAGGGAATTAATTTTGATCTGCCCCAAGTGATTGAACATGCACCACTAATTCCAGGGATTGAGCACGTTGGAGGAGATATGTTTGCAAGTGTTCCACAGGGTGACGCCATAATACTAAAGGCTGTATGCCACAATTGGTCAGATGAAAAATGCGTAGAATTTTTAAGCAATTGTCACAAAGCGTTGTCACCAAATGGGAAGGTGATTGTTGTGGAGTTTATATTGCCAGAAGAACCAGAACCAACTGAAGAATCCAAACTTGTTTCTATTCTCGACAACCTCATGTTTATCACAGTTGGTGGAAGGGAAAGGACTCAGAAACAATATGAGAATTTGAGCAAGCTCTCTGGATTTTCTAAATTTCGTGTTGCTTGTCGTGCTTTCAATGCTTTGGGAGTGATGGAATTTTATAAATAA 1065 0.4094 MSKTDDGACLSAMLLTTNLVYPAVLNAAIDLNLFEIIAKGTPHGAFMSPFEIASKLPTQHSDLPNRLDRMLRLLASYSLLTCSTRTTEYGTTERVYGLSQVGKYLVSDESRGYLASFTTFLCYPALLQVWLNFKEAVVDADIDLFKKLHGITKYQYMEKDPTMNHIFNKSMADVCATEMKRMLEIYAGFEGISTLVDVGGGNGQNLKMIISKYPLIKGINFDLPQVIEHAPLIPGIEHVGGDMFASVPQGDAIILKAVCHNWSDEKCVEFLSNCHKALSPNGKVIVVEFILPEEPEPTEESKLVSILDNLMFITVGGRERTQKQYENLSKLSGFSKFRVACRAFNALGVMEFYK 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2574g00049 354 CDD AdoMet_MTases 194 291 - -
Gabi2574g00049 354 FunFam Caffeic acid 3-O-methyltransferase 1 105 - -
Gabi2574g00049 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 351 IPR029063 -
Gabi2574g00049 354 Gene3D - 1 105 IPR036388 -
Gabi2574g00049 354 SUPERFAMILY "Winged helix" DNA-binding domain 6 109 IPR036390 -
Gabi2574g00049 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 13 354 IPR016461 GO:0008168
Gabi2574g00049 354 Gene3D Vaccinia Virus protein VP39 106 354 IPR029063 -
Gabi2574g00049 354 FunFam Caffeic acid O-methyltransferase 108 354 - -
Gabi2574g00049 354 Pfam Dimerisation domain 24 75 IPR012967 GO:0046983
Gabi2574g00049 354 PIRSF O-mtase 1 354 IPR016461 GO:0008168
Gabi2574g00049 354 Pfam O-methyltransferase domain 130 335 IPR001077 GO:0008171
Gabi2574g00049 354 PANTHER O-METHYLTRANSFERASE 13 344 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2574g00049 Gabi-Chr2574 520802 522606 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2574g00049 4 354 Monolignol Biosynthesis Gene Families AT5G54160 49.716 1.07e-117 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2574g00049 - - gmx:100798347 615.92