Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2574g00044 ATGGATTTTTTCTTGCAATCCTTATTACTAATTTTCATAACCTTGATTGCATCTATCTATGTTTTCCAGCAAAGAAAACCAGGTGGCTCTAAAAACTTGCCTCCAGGTAGTTTTGGGTGGCCTCTAGTGGGTGAAACCTACCAAATTTTGTTCAAAAAGATTGAACATTTCCTTCAAAAGAGGGAAAAAAAGTACTCCTCAGAGATCTTCAAGACAAATTTACTAGGAGAGCCAACAGTTGTTCTTTGTGGTCCTGGTGCAAACAAATTTGTCTCCATGAATGAGCCTAAGCTTATCAAAGTTTGGTACTTGAAAACTCAGCGCAGGTTCTTCAATCTTCCTGATCAGAAACATGCAGCTATGCCAAAACAAGCAGCAGTAGCTGCAGCTCCAGTGAAGATCTTGGGGTTTCTGAAACCTGAAGGACTAGTTAGGTACATGGGGAACAACATTGAGTCCATCATAAACCAACACTTCTTGACACATTGGGAAGGAAAAACAGAACTTAAGGTGTACCCTTTGGTGAAAGCCTTTTCCCTTACACTGGTCTATCAATTCTTCTTAGGCATTGATGAACCCCATCATATACCAAAATTTGCTAGCAAGTTTGACAGCTTGTATTCTGGACTTTATTCTGTTCCTGTCTCTCTCCCAGGCTCTACATATAGTAGGGCACTGAAGGCTGCAGATGCAATTCGGAAAGATATCCAGTTTCTGATCAAAGAGAAGATTGATGCTTTTTCCAAGGGGCAAGTTATGGATGACCTACTAGCACACATAGTTGGTGCAGAGCAGGGTGGAAAATATGTGCCAAAAATTGAAATAAGCAACATCATGATGGGATTGATGAATTCCAGCTACACACCAATAGCAATTACACTGGCTTTCATGATCAAACATATTGGACAGAGGCCTGATATCTACCAAAAAATTGTATCCGAACATGCTGATATTACAAAATCAAAAGGATCTGGTACTGCTCTAGATTGGGACAGCATACAGAAATTGAAATACACATGGGCTGTTGCACAGGAGACCATGAGACTCTACCCAACTGCACCAGGAGCATTCAGAGAGGCTGTATCAGATTTAACCTATGAAGGTTTTACTGTTCCAAAGGGATGGAAGATTTTTTGGGCAATTAGTGGAACAAACAAGAATCCCAAGTACTTTCATGAACCTGAAAGTTTTGATCCCTCAAGGTTTGAAAGTAATGTTCCTGCTCCATACACTTACATACCCTTTGGAGCTGGACCTAGATCTTGCCCTGGAAAGGACTACACAAGATTTGTGATTATCACTTTCATTCACAATCTTATAACCAAGTTCAAGTGGGAAGTTATGCTTCCTGATGAAAAAGTATCTGGTGCTTTGGTACCTCTCCCAGCAGAGGGAATTCCTATCCGTCTTCATCACTTCTAA 1422 0.4058 MDFFLQSLLLIFITLIASIYVFQQRKPGGSKNLPPGSFGWPLVGETYQILFKKIEHFLQKREKKYSSEIFKTNLLGEPTVVLCGPGANKFVSMNEPKLIKVWYLKTQRRFFNLPDQKHAAMPKQAAVAAAPVKILGFLKPEGLVRYMGNNIESIINQHFLTHWEGKTELKVYPLVKAFSLTLVYQFFLGIDEPHHIPKFASKFDSLYSGLYSVPVSLPGSTYSRALKAADAIRKDIQFLIKEKIDAFSKGQVMDDLLAHIVGAEQGGKYVPKIEISNIMMGLMNSSYTPIAITLAFMIKHIGQRPDIYQKIVSEHADITKSKGSGTALDWDSIQKLKYTWAVAQETMRLYPTAPGAFREAVSDLTYEGFTVPKGWKIFWAISGTNKNPKYFHEPESFDPSRFESNVPAPYTYIPFGAGPRSCPGKDYTRFVIITFIHNLITKFKWEVMLPDEKVSGALVPLPAEGIPIRLHHF 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2574g00044 473 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Gabi2574g00044 473 Gene3D Cytochrome P450 24 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2574g00044 473 SUPERFAMILY Cytochrome P450 31 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2574g00044 473 PANTHER CYTOCHROME P450 26 31 450 - -
Gabi2574g00044 473 FunFam Taxadiene 5-alpha hydroxylase 24 473 - -
Gabi2574g00044 473 PRINTS E-class P450 group I signature 340 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2574g00044 473 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2574g00044 473 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2574g00044 473 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2574g00044 473 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2574g00044 473 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2574g00044 473 PRINTS P450 superfamily signature 303 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2574g00044 473 PRINTS P450 superfamily signature 413 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2574g00044 473 Pfam Cytochrome P450 34 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2574g00044 473 CDD CYP90-like 61 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2574g00044 Gabi-Chr2574 453984 456309 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2574g00044 1 456 Cytochrome P450 AT4G19230 31.659 9.45e-69 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2574g00044 K20667 - gmx:100782971 764.992