Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2574g00014 ATGGATGGTCAGGGTGACACTCTCCATAAGCATCCAAAGAAGGAGCATGAAGGCCCTAAGGAACCACATGTTTTCTTACATGGGGACTTGGATCTGGTGATCATAGAAGCCAAGTCTCTTCCTAATTTAGATTTATCTTCTGAAGCAGTTAGAAAATGTATCACTATGGGCAACATGTGCACACCTCCCTTTGTAAAGGGACTTAAGACACACTCTGGAAAAGATAAGATGATAACTAGTGACCCTTATGTATCTGTGTGCCTAGCTGGGGCTACAATAGCTCAAACTAGAGTTATTGCTAACTGTGAGAACCCTCTGTGGGATGAGCAATTTGTTGTCCCTGTTGCTCACCCTGTTCAAAAAGTGGAGTTTCTTGTCAAGGATAATGATGTTCTTGGGGCAGAACTCATTGGAGTAGTGGAGATACCTGTTCAAAAGATACTGTCAGGAAATACTATTAATGATTGGTTTCCCATCATTGGTCAATATGGAAACTGCTTAAAACCTTATCCTGAGTTACATATTTCTGTTCAGTTTAGGCCAATTGGAGTGAACCCTTCAGAAAATGGGGATAGGACAGATTATCTAGGAGTTCCTAAAACATATTTCCCTCTCAGGAAAGGAGGGAGTGTGACTCTATATCAAGATGCACATATACCAGATGGTATGCTACCTCAAATTTCACTTGAGGGTGGAAAAGTATATCAACACAGTAAATGTTGGGAGGATATATGCCATGCAATTTTGGAAGCTCATCACCTAATATATGTTGTAGGATGGTCAGTTTACCACAAAATAAAGCTTGTAAGAGAGCCAACAAAACCATTACCTTCTGGGGGAGAGCTTTCACTTGGAGAGCTGTTGAAATACAAGTCACAAGAAGGACTCCGAGTGGTTATGCTGATTTGGGATGACAGAACGTCACATGACAAGTTTCTTTTGAAAACAGATGGTGTCATGCAGACTCACGATGAAGAAACTAAGAAGTTTTTCAAAAATTCCACTGTTCATTGTGTGCTATCTCCTCGCTATGCAAGCAATAAGCTCAGTATTTTCAAGCAACAGGTTGTGGGAACCCTCTTTACGCATCACCAGAAATGTGTGCTTGTAGACACTCAAGCTTCTGGGAATAATCGTAAAATAACTGCTTTTATTGGTGGCTTGGATCTATGTGATGGCAGATATGATACACCACAGCATCGGCTTTTTGGGAATCTAGATACAGTCTTCAAAAATGATTTTCACAATCCTACATTTCAAGCACCTATAAATTCGTCTGGACCAAGGCAGCCATGGCATGACTTACATTGCAAAATTGAAGGTCCTGCTGCATATGATATATTAACCAATTTTGAACAAAGATGGAGGAAGGCCAAAAAATGGCGCGACTTCAGGCTTAAAAAGGTGACAAATTGGCATGATGATGCTTTGCTAAGGCTAGACCGTATTTCATGGATTCTCAATCCATCTTCTGGTCCTGATGGTGATAAAGCTGTTCATGTAACCGATGAAAATGATCCTGAGAGTTGGAATGTTCAGGTATTTCGGTCCATAGATTCAGGATCCGTGAAGGGCTTTCCAAAGGATATTGACAAAGCTAAGGCTCAGAATCTTTTATGTGGAAAAAATTTGAAAGTAGATCAAAGCATCCATGCTGCTTATGTAAAAGCAATAAGATCAGCTCAGCACTTCATATATATTGAGAATCAGTATTTTTTGGGCTCCTCATATCATTGGCCTTCATATAAAAATGCAGGTGCAAATCACTTGATTCCCATGGAGTTGGCTTTGAAAATTGCCAGCAAGATCAGCGCAAATGAACGTTTTTCTGTATATATAGTTATACCAATGTGGCCAGAGGGGGTTCCATCTAGTGCTGCTGTTCAAGAAATACTGTTCTGGCAGGGACAGACAATGTCTATGATGTACAGGATTGTTGCAGATGCCCTTAAAAAAGCAGGTCTCTCCAATAAGTATCATCCGCAAGATTATCTTAACTTTTACTGCCTTGGAAGGAGAGAACCTCAAGCCTCGGAAAGTTCATCAATACCAAATCCATCTTCTGAAAACCGTGCTTTGGTATCAGTTAAGAAATTCAAACGTTTTATGATTTATGTTCATGCCAAAGGAATGATAGTTGATGATGAGTACGTAATCATTGGATCAGCAAATATTAACCAGAGATCGTTGGATGGTTCAAGGGACACAGAAATAGCAATGGGTGCTTATCAACCAAAATATACATGGACAGAAAAGAATTCTCATCCACATGGCCAGGTGTATGGATACCGAATGTCACTGTGGGCTGAGCACCTTGGTGGTCTTGATGATCCTTTTGCTGAACCTCACAGCCTGGATTGTGTTAGGCATGTCAACATGATTGCCAGAAAAAACTGGGACACATATGTGTCTGAGGAAGGGAAACAGATGAGGGGACACTTGATGCAGTATCCAGTTCATGTCAGCAGTGATGGAAAGGTGAGTGCATTAGATGATTATGAGTCCTTTCCTGATGTTGGTGGCAAAATTCTTGGATCACCCAATTCACTTCCGGATGCACTAACCACATGA 2571 0.4076 MDGQGDTLHKHPKKEHEGPKEPHVFLHGDLDLVIIEAKSLPNLDLSSEAVRKCITMGNMCTPPFVKGLKTHSGKDKMITSDPYVSVCLAGATIAQTRVIANCENPLWDEQFVVPVAHPVQKVEFLVKDNDVLGAELIGVVEIPVQKILSGNTINDWFPIIGQYGNCLKPYPELHISVQFRPIGVNPSENGDRTDYLGVPKTYFPLRKGGSVTLYQDAHIPDGMLPQISLEGGKVYQHSKCWEDICHAILEAHHLIYVVGWSVYHKIKLVREPTKPLPSGGELSLGELLKYKSQEGLRVVMLIWDDRTSHDKFLLKTDGVMQTHDEETKKFFKNSTVHCVLSPRYASNKLSIFKQQVVGTLFTHHQKCVLVDTQASGNNRKITAFIGGLDLCDGRYDTPQHRLFGNLDTVFKNDFHNPTFQAPINSSGPRQPWHDLHCKIEGPAAYDILTNFEQRWRKAKKWRDFRLKKVTNWHDDALLRLDRISWILNPSSGPDGDKAVHVTDENDPESWNVQVFRSIDSGSVKGFPKDIDKAKAQNLLCGKNLKVDQSIHAAYVKAIRSAQHFIYIENQYFLGSSYHWPSYKNAGANHLIPMELALKIASKISANERFSVYIVIPMWPEGVPSSAAVQEILFWQGQTMSMMYRIVADALKKAGLSNKYHPQDYLNFYCLGRREPQASESSSIPNPSSENRALVSVKKFKRFMIYVHAKGMIVDDEYVIIGSANINQRSLDGSRDTEIAMGAYQPKYTWTEKNSHPHGQVYGYRMSLWAEHLGGLDDPFAEPHSLDCVRHVNMIARKNWDTYVSEEGKQMRGHLMQYPVHVSSDGKVSALDDYESFPDVGGKILGSPNSLPDALTT 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2574g00014 856 Pfam C2 domain 28 159 IPR000008 -
Gabi2574g00014 856 MobiDBLite consensus disorder prediction 1 22 - -
Gabi2574g00014 856 Pfam Phospholipase D C terminal 776 846 IPR024632 -
Gabi2574g00014 856 SUPERFAMILY Phospholipase D/nuclease 548 787 - -
Gabi2574g00014 856 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 702 729 IPR001736 GO:0003824
Gabi2574g00014 856 SMART pld_4 359 394 IPR001736 GO:0003824
Gabi2574g00014 856 SMART pld_4 702 729 IPR001736 GO:0003824
Gabi2574g00014 856 SUPERFAMILY Phospholipase D/nuclease 200 464 - -
Gabi2574g00014 856 Pfam PLD-like domain 610 738 IPR025202 -
Gabi2574g00014 856 ProSiteProfiles C2 domain profile. 11 157 IPR000008 -
Gabi2574g00014 856 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 359 394 IPR001736 GO:0003824
Gabi2574g00014 856 FunFam Phospholipase D delta 231 476 - -
Gabi2574g00014 856 PANTHER PHOSPHOLIPASE D 22 845 IPR015679 -
Gabi2574g00014 856 Gene3D C2 domain 24 180 IPR035892 -
Gabi2574g00014 856 CDD C2_plant_PLD 23 180 - -
Gabi2574g00014 856 PIRSF PLD_plant 15 856 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Gabi2574g00014 856 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 26 181 IPR035892 -
Gabi2574g00014 856 Gene3D Endonuclease Chain A 515 754 - -
Gabi2574g00014 856 SMART C2_3c 29 156 IPR000008 -
Gabi2574g00014 856 Gene3D Endonuclease Chain A 230 477 - -
Gabi2574g00014 856 Pfam Phospholipase D Active site motif 360 394 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2574g00014 Gabi-Chr2574 168497 174024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2574g00014 24 855 Phospholipase D Gene Family (Wang group) AT2G42010 55.041 0.0 944
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2574g00014 K01115 - gmx:100779740 1550.8