Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2574g00011 ATGGGTAAGAGGTCTTTGTCCTTCTCCTTCCGCCGCTCAACTCCCCGCCGCCGACACAAGCATGCGGCGGTGCCGCCTCCCGGAGTTTCCGGATCGCCGGTCGCGGTTTCCAGCTCAAAGAAGAAAACCGGCGGTGCCAGGTTGTGGATGCGGTTTGACCGGTCTGGCCGGTCAGAGCTTATGGAGTTGGACAAGAACACAATCATTCGCCAAGCCTCGATTCCCGCCAGGGATTTGAGAATTTTGGGCCCTATCTTCTCTCACTCTTCCACTATTCTCGCTAGAGAGAAAGCAATGGTAGTGAATTTGGAGTTTATAAAGGCTATAGTCACAGCTGAAGAAGTGCTATTGCTTGATCCTCTTCGTCAAGAGGTTCTTCCGTTTGTTGAGCAACTCAGGCAACAGCTTCCATATAAGAATGAACAAGAAAGTGAGATGCAGCTGGTTTCTACTGGGAGACAATGGTTACCATTGGCTGAGGTTTCTGAAGGTTTGCAGTCTGAGCTGCCATTTGAGTTTCATGTTTTGGAGATTGCTTTAGAAGTTGTGTGTACATATCTTGACTCAAGTGTGGCAGACCTTGAGAGAGGTGCTTATCCTGTATTGGATGAATTGGCTAGGAATGTTAGCACTAAGAATCTTGAACATGTGCGAAGTTTGAAGAGTAATCTTACTCGTTTGCTGGCACGCGTGCAAAAGATGCGAGATGAAATTGAACATTTATTAGATGACAATGAAGATATGGCACAGCTATATTTGACAAGGAAGTGGTTGCAGAATCAGCAAATTGAGGCTCATTTGGGTGCCACTAACTCAAATAACGTTTCTAATACTGCACCCATTGTTCGTCGAATTGGTTCTAACAGAAGTGGAAGTCTAATGACTAGCAAGTTTGGTGATGATAATGATGTGGAGGATCTGGAGATGTTGCTTGAGGCATATTTTATGCAGTTGGATGGAATTCGTAACAAGATATTGTCCGTTAGGGAATATATTGATGACACAGAAGACTATGTCAACATCCAACTTGATAACCATAGAAATGAACTAATTGAGCTGCAGCTGACATTGACCATTGCATCATTTTCCATTGCTATTGAAACTCTGATTGCTGGTGTATTTGGCATGAACATTCATTGTTCACTATATGAGAAAAAGGGCATATTTTGGACCTTTGTTGGGAGTGTTTCTGCAGCTTGCGTACTGCTTTTCCTGCTTGTTTTTGCATATGCAAAATGGAAAAAGTTGCTCGGATCATAA 1260 0.4381 MGKRSLSFSFRRSTPRRRHKHAAVPPPGVSGSPVAVSSSKKKTGGARLWMRFDRSGRSELMELDKNTIIRQASIPARDLRILGPIFSHSSTILAREKAMVVNLEFIKAIVTAEEVLLLDPLRQEVLPFVEQLRQQLPYKNEQESEMQLVSTGRQWLPLAEVSEGLQSELPFEFHVLEIALEVVCTYLDSSVADLERGAYPVLDELARNVSTKNLEHVRSLKSNLTRLLARVQKMRDEIEHLLDDNEDMAQLYLTRKWLQNQQIEAHLGATNSNNVSNTAPIVRRIGSNRSGSLMTSKFGDDNDVEDLEMLLEAYFMQLDGIRNKILSVREYIDDTEDYVNIQLDNHRNELIELQLTLTIASFSIAIETLIAGVFGMNIHCSLYEKKGIFWTFVGSVSAACVLLFLLVFAYAKWKKLLGS 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2574g00011 419 MobiDBLite consensus disorder prediction 1 42 - -
Gabi2574g00011 419 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 355 407 IPR045863 -
Gabi2574g00011 419 Coils Coil 217 251 - -
Gabi2574g00011 419 Gene3D Magnesium transport protein CorA, transmembrane region 121 350 - -
Gabi2574g00011 419 Gene3D Magnesium transport protein CorA, transmembrane region 357 414 - -
Gabi2574g00011 419 Pfam CorA-like Mg2+ transporter protein 306 410 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Gabi2574g00011 419 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 25 417 IPR039204 -
Gabi2574g00011 419 Gene3D - 34 120 - -
Gabi2574g00011 419 CDD Mrs2_Mfm1p-like 49 416 IPR039204 -
Gabi2574g00011 419 FunFam Magnesium transporter MRS2-1 37 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2574g00011 Gabi-Chr2574 147000 150618 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2574g00011 1 419 MRS2 Gene Family AT3G58970 66.213 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2574g00011 K16075 - gmx:100812561 617.076