Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2574g00009 ATGGCAAATTCAAAGGGCCCATCGAGTATCAGAAATTTGATGTGTCCTGGAAAGCATGCTTTACTGCCTCCTAAATGCCCATTTCCAAGTGTTTCCCAAGCATATGCTGATTATGTCCCAAATTCTACTCATGGTTCAAAGGCTGCTAACAAACCTAGAGAGGGACACCACCAACGTACTTCATCTGAGAGCCTTGTCTTAGAAGAGCAGCCTTCATGGATTGATGATCTCCTTAATGAGCCAGAGACACCTGTCCGAAGGGGTGGTCATCGTCGTTCATCAAGCGATTCTTTTGCATACATAGACACAATTAATATGTCTAACATCAGTTATGCAGATCAAAATGAGTATAAATATAAGAATTTGACATCTGTTTCATCTTGGTTATCTCAAGACTTTGACCGCAGCAAGGATGCTCGTCATATGCCCATGTATACAGAAATGAACTCAGCAAAACAGAAAAATAGGCCATGGGACTCTTTTTCAAATGCTGTAACAAATCTGGGTGATGTCCCCTCTGGCAAAGATAATGTTTCTTTTCAGAGTTCAAGATTACCATGCACACCACATGAAGCAGATGGGCATCTACCAACTGCAAATGAAAAGTATGATTCAGTAGAATCTGATTTACAGGATGCAAAATCATCTTTTGAAAGAAATGATGGTTCACATGCAAAGTCATCTGCATTTGAAACAGATACAAAACGTGCTAAACAGCAATTTGCTCAACGTTCACGGGTCCGTAAACTTCAGTACATAGCCGAGCTGGAAAGAAATGTGCAAGCTTTACAGGCTGAAGGTTCTGAAGTCTCAGCCGAGCTTGAATTTCTTAACCAGCAGAATCTTATCCTGAGTATGGAGAATAAAGCACTCAAGCAACGTTTAGAAAGTTTAGCACAGGAGCAGCTTATCAAATATTTGGAGCAGGAAGTACTGGAAAGAGAGATTGGAAGATTACGTGCATTGTTTCAGCAGCAGCAGACACATCAGCCGCAGCAAAAACCATCTGGTAGTCATAGACGCACCAACAGCAGAGACCTTGAATCTCAGTTTGCAAACCTTTCTCTAAAACACAAGGACACCAATTCAGGGCACGACCCTGCGACCGGAGCACGCAGAATTTAG 1125 0.4204 MANSKGPSSIRNLMCPGKHALLPPKCPFPSVSQAYADYVPNSTHGSKAANKPREGHHQRTSSESLVLEEQPSWIDDLLNEPETPVRRGGHRRSSSDSFAYIDTINMSNISYADQNEYKYKNLTSVSSWLSQDFDRSKDARHMPMYTEMNSAKQKNRPWDSFSNAVTNLGDVPSGKDNVSFQSSRLPCTPHEADGHLPTANEKYDSVESDLQDAKSSFERNDGSHAKSSAFETDTKRAKQQFAQRSRVRKLQYIAELERNVQALQAEGSEVSAELEFLNQQNLILSMENKALKQRLESLAQEQLIKYLEQEVLEREIGRLRALFQQQQTHQPQQKPSGSHRRTNSRDLESQFANLSLKHKDTNSGHDPATGARRI 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2574g00009 374 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 9 356 IPR044797 -
Gabi2574g00009 374 CDD bZIP_plant_RF2 233 281 IPR044759 GO:0003700|GO:0006355
Gabi2574g00009 374 SMART brlzneu 231 290 IPR004827 GO:0003700|GO:0006355
Gabi2574g00009 374 MobiDBLite consensus disorder prediction 49 63 - -
Gabi2574g00009 374 MobiDBLite consensus disorder prediction 39 74 - -
Gabi2574g00009 374 MobiDBLite consensus disorder prediction 324 338 - -
Gabi2574g00009 374 MobiDBLite consensus disorder prediction 175 237 - -
Gabi2574g00009 374 MobiDBLite consensus disorder prediction 195 237 - -
Gabi2574g00009 374 SUPERFAMILY Leucine zipper domain 242 284 IPR046347 GO:0003700|GO:0006355
Gabi2574g00009 374 MobiDBLite consensus disorder prediction 324 374 - -
Gabi2574g00009 374 MobiDBLite consensus disorder prediction 359 374 - -
Gabi2574g00009 374 Gene3D - 235 287 - -
Gabi2574g00009 374 Coils Coil 246 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2574g00009 Gabi-Chr2574 132423 137975 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2574g00009 20 305 bZIP Transcription Factor Family AT2G42380 30.233 2.63e-24 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2574g00009 - - gmx:100813098 591.267