Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2574g00008 ATGGCAAATTCAAAGGGCTCATCGGGTATAAGAAATTTGATGTGTCCTGGAAAGCATGCTCTACTTCCTCCCAAAAGCCCATTTCCTAGTGTTTCGCAAGCATATGCTGATTATGTCCCAAATCCTACTCTTGGTTCAAAGGCTGCTAACAAACCTAGAGAGGGAAAGACACACCACCACCGTACATCATCTGAGAACCTTGTCTTGGAGGAGCAGCCTTCATGGATTGATGATCTACTTAATGAGCCTGAGACACCTGTCCGAAGGGGTGGTCATCGGCGTTCATCAAGTGATTCTTTCGCATACATAGACACAGTTAATGTGTCTAACATCAGTTATGCAGATCAAGATGAGTATAAATATAAGAATTTGGCATCTGTTTCATCATGGTCATCGCAAGATTTTGACCACAACAAAGATGCTTGTCATATGCACATGTATCCAGAAATGAACTCAGCAAAGCAGAATAGGGCATGGGACTCTTTTTCAAATGCTGTAAGAAATCTAGGTGGTGTTCCCTCTGGCAAAGATAATGTTGCTTTTCAGAGTTCAGGATCACCATGTACACCACATGAAGCAGATGGGCTTCTGCCAACTGCAAATGAAAAGCATGATTCTGTAGAATCTGGCCTACAGGATGCAAAATCATCTTCTGAAAGAAATGATGGTTCACATGCAAAGTCATCTGCTTCTGAAACAGATACAAAACGTGCTAAACAGCAATTTGCTCAACGTTCACGGGTACGTAAACTTCAATACATAGCTGAGCTGGAAAGAAATGTACAAGCTTTACAGGCAGAAGGGTCTGGAGTCTCAGCTGAGCTTGAATTTCTTAACCAGCAGAATCTTATCCTGAGTATGGAGAATAAAGCACTCAAGCAACGTTTAGAAAGTTTAGCACAGGAGCAGCTTATCAAATATTTGGAGCAGGAAGTACTGGAAAGAGAGATTGGAAGAATACGTGCATTGTTTCAACAGCAGCAGACACATCAGCCGCAACAACAACCATCTGCTAGTCATAGACGTACCAAAAGCAGAGACCTTGAATCTCAGTTTGCAAACCTTTCTCTGAAACACAAGGGCACCAATTCAGGTCATGACCCTGCAACTGGAGCTCTCAGAATTTAG 1128 0.4246 MANSKGSSGIRNLMCPGKHALLPPKSPFPSVSQAYADYVPNPTLGSKAANKPREGKTHHHRTSSENLVLEEQPSWIDDLLNEPETPVRRGGHRRSSSDSFAYIDTVNVSNISYADQDEYKYKNLASVSSWSSQDFDHNKDACHMHMYPEMNSAKQNRAWDSFSNAVRNLGGVPSGKDNVAFQSSGSPCTPHEADGLLPTANEKHDSVESGLQDAKSSSERNDGSHAKSSASETDTKRAKQQFAQRSRVRKLQYIAELERNVQALQAEGSGVSAELEFLNQQNLILSMENKALKQRLESLAQEQLIKYLEQEVLEREIGRIRALFQQQQTHQPQQQPSASHRRTKSRDLESQFANLSLKHKGTNSGHDPATGALRI 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2574g00008 375 MobiDBLite consensus disorder prediction 325 339 - -
Gabi2574g00008 375 MobiDBLite consensus disorder prediction 39 70 - -
Gabi2574g00008 375 MobiDBLite consensus disorder prediction 349 363 - -
Gabi2574g00008 375 MobiDBLite consensus disorder prediction 173 243 - -
Gabi2574g00008 375 Coils Coil 247 302 - -
Gabi2574g00008 375 MobiDBLite consensus disorder prediction 218 241 - -
Gabi2574g00008 375 SUPERFAMILY Leucine zipper domain 243 285 IPR046347 GO:0003700|GO:0006355
Gabi2574g00008 375 CDD bZIP_plant_RF2 234 282 IPR044759 GO:0003700|GO:0006355
Gabi2574g00008 375 Gene3D - 235 288 - -
Gabi2574g00008 375 SMART brlzneu 232 291 IPR004827 GO:0003700|GO:0006355
Gabi2574g00008 375 MobiDBLite consensus disorder prediction 325 375 - -
Gabi2574g00008 375 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 10 357 IPR044797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2574g00008 Gabi-Chr2574 116151 123342 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2574g00008 20 306 bZIP Transcription Factor Family AT2G42380 29.492 6.75e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2574g00008 - - gmx:100813098 595.504