Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi2570g00007 | ATGCAGACAAAAGAAGGAGGAGAGAGAAAAAAGGAGCATAAAGTTCCTTTGTTAAAGCTCTTCTCTTTTGCTGACTTTTATGACTTTGTCTTAATGTTTGTTGGATCTGTTGGGGCATGTATTCACGGTGCTTCTGTTCCCGTTTTCTTTATCTTCTTTGGAAAGTTGATCAATATCATAGGCTTGGCTTATCTTTTCCCCAAGGAAGCTTCTCACCAAGTTGCCAAGTACTCGTTGGATTTTGTGTATCTAAGTATAGCAATATTGTTTTCATCTTGGACAGAGGTGGCTTGTTGGATGCATACTGGGGAACGTCAAGCTGCAAAGATGAGAATGGCTTATTTAAGGTCAATGCTGAATCAAGATATAAGCCTATTTGATACCGAGGCATCAACGGGAGAGGTCATTTCTGCCATCACAAGTGACATTATCATTGTTCAAGATGCACTATCCGAGAAGGTAGGGAACTTCATGCACTACATAAGCCGATTTATAGCTGGCTTTACTATTGGCTTTGTCAGAGTGTGGCAGATAAGTCTAGTGACACTTTCAATTGTCCCCTTGATTGCCCTTGCTGGAGGTCTTTATGCATATGTGACAATTGGGCTTATTGCAAAAGTTCGAAAAGCTTATGTGAGGGCTGGTGAAATTGCTGAAGAGGTGATAGGCAATGTTAGGACGGTACAAGCATTTGCAGGAGAAGAAAGAGCAGTGAGATCATATAAAGAGGCTCTCTTGAAAACTTATGTAAACGGTAGAAAAGCAGGTTTAGCAAAGGGTCTTGGACTTGGTTCAATGCATTGTGTCCTTTTTCTATCGTGGGCTTTGCTTGTTTGGTTCACTAGCGTTGTTGTTCACAAGAATATTGCCAATGGGGGCGAGTCTTTCACTACCATGCTCAATGTCGTCATCTCTGGCCTGTCACTTGGGCAGGCAGCACCAGATATTTCTGCATTTATCCGGGCAAAAGCAGCAGCTTATCCAATTTTTGAGATGATAGAGAGGGACACAGTGAGCAAAAGCAGTTCAAAAACTGGTCGCAAATTAAGCAAATTGGAGGGTCATATTCAGTTTAAGGATGTCTGTTTCAGTTATCCATCTCGTCCAGAAGTAGCAATCTTCAATAACCTCTGTCTTGACATTCCTTCAGGGAAAATTGTTGCCCTTGTGGGAGGAAGTGGTTCTGGAAAGAGCACTGTTATATCATTGATTGAACGCTTTTATGAACCCCTTTCTGGTCAGATACTATTAGATAGGAATGATATCAGGGAACTTGATCTCAAATGGCTAAGGCAGCAAATTGGGCTGGTTAATCAAGAACCTGCCCTTTTTGCAACCAGCATCAAGGAGAACATACTGTATGGAAAAGATGATGCCACATTTGAAGAACTAAAACGTGCTGTGAAGCTTTCAGATGCTCAGTCTTTCATTAACAATCTTCCTGATAGATTAGAAACTCAGGTTGGTGAGAGAGGGATACAATTATCAGGTGGGCAAAAGCAAAGGATTGCATTATCTCGTGCTATCGTGAAGAATCCATCAATCCTTTTGTTGGATGAAGCAACCAGTGCTCTGGATGCGGAGTCTGAGAAGAGTGTACAGGAAGCTCTTGATCGTGTCATGGTTGGTAGAACAACTGTGGTTGTGGCACACAGACTTTCTACAATTAGGAATGCAGATGTGATAGGTGTTGTTCAGGGAGGGAGGATTGTGGAAACTGGTAACCATGAAGAGCTTATTTCCAACCCAACTAGTGTATATGCATCTCTTGTTCAACTCCAAGACGCAACTTCTCTGCAACGCCTCCCCTCAGTTGGTCCTAGCTTGGGACGGCAGTCGAGCATAAACTACTCAAGGGAATTATCCCGCACAACAGCAAGCTTTGGTGGTAGTTTTCGGTCAGATAAAGAATCTATTGGCAAGGTTTGTGCTGATGAAGCAGAAAATGCAAGCAAATCAAAGCGTGTTTCTGCAGCAAGACTATATTCTATGGTTGGTCCTGACTGGTTTTATGGGGTTTTTGGGACCTTCTGTGCATTTGTTGCTGGAGCTCAGATGCCACTTTTTGCGCTTGGAATCTCTCATGCTCTTGTATCGTACTATATGGACTGGGATACAACACGTCATGAAGTCAAAAAAATTGCTTTCCTCTTCTGTGGAGCAGCAGTTATAACCATCACTGTCCATGCAATTGAACATCTTTCTTTTGGAATCATGGGCGAGCGACTTACCCTTCGTGTGAGAGAAATGATGTTTTCTGCTATTTTGAAGAATGAAATTGGCTGGTTTGATGATACAAACAACACAAGTTCTATGCTTTCATCGCGATTAGAGACGGATGCAACTTTATTAAGAAGTATAGTTGTTGATCGTTCTACAATTCTGTTACAGAATGTTGGTCTGGTTGTTACTTCATTTATTATTGCCTTCATCTTGAACTGGAGAATAACGCTTGTTGTCTTGGCCACATATCCTTTGATCATTAGTGGTCACATCAGTGAGAAACTCTTCATGAAAGGTTACGGTGGCAACTTGAGCAAAGCATATCTAAAAGCCAACATGTTGGCTGGGGAGGCTGTGAGCAATATACGCACTGTTGCAGCATTTTGTTCTGAAGATAAGGTCCTTGACCTTTATGCTAATGAGCTTGTTGATCCTTCCAAACGTTCATTTCAACGGGGCCAAATTGCTGGGATATTCTATGGCATGTCCCAGTTCTTTATTTTCTCATCTTATGGCCTTGCCTTGTGGTATGGATCTGTTTTGATGGGAAAGGAGCTTGCTAGCTTTAAATCAGTAATGAAGTCATTTATGGTTTTAATTGTAACAGCACTGGCTATGGGGGAGACTTTGGCACTTGCCCCAGACCTTTTGAAAGGGAATCAAATGGTTGCATCAGTTTTTGAAGTGATGGATAGAAAATCAGGAATAATGGGTGATAATGGAGAAGAGTTGAAGACTGTGGAGGGAACAATTGAGCTCAAAAGAATCCATTTCAGCTACCCTTCAAGGCCGGATGTGATTATTTTCAAGGATTTCAATCTAAGAGTTCCTTCAGGCAAGAGTATTGCCTTAGTGGGGCAAAGTGGTTCTGGTAAAAGCTCTGTGATCTCCCTTATACTCAGATTTTACGATCCAACATCTGGAAGGGTGTTAATTGATGGAAAAGACATCACGAGACTTAATCTGAAATCTCTCAGGAAACATATTGGTCTTGTGCAACAAGAACCGGCTCTTTTTGCAACATCAATTTATGAAAACATTCTTTACGGGAAGGAAGGTGCCTCTGATTCAGAAGTAATTGAAGCAGCTAAGCTTGCCAATGCTCACAACTTCATCAGTGGTCTTCCAGAAGGTTACTCCACCAAAGTTGGTGAGCGAGGAGTGCAACTATCTGGTGGTCAAAGACAAAGGGTAGCCATTGCAAGAGCAGTTTTAAAGAATCCTGAAATATTGCTACTAGATGAAGCCACTAGTGCACTGGATGTGGAGTCAGAGCGTGTGGTGCAGCAAGCTTTGGACAGATTAATGCAGAACAGAACAACAGTTATGGTGGCACATAGACTATCCACTATAAGAAATGCTGACCAAATCTCTGTTTTACAGGATGGAATGATAATTGAGCAAGGGACTCATTCAAGTCTTGTAGAGAATAAAAATGGAGCATACTTTAAATTAGTCAACCTTCAACAACAACAGCATCAACAATAG | 3711 | 0.4171 | MQTKEGGERKKEHKVPLLKLFSFADFYDFVLMFVGSVGACIHGASVPVFFIFFGKLINIIGLAYLFPKEASHQVAKYSLDFVYLSIAILFSSWTEVACWMHTGERQAAKMRMAYLRSMLNQDISLFDTEASTGEVISAITSDIIIVQDALSEKVGNFMHYISRFIAGFTIGFVRVWQISLVTLSIVPLIALAGGLYAYVTIGLIAKVRKAYVRAGEIAEEVIGNVRTVQAFAGEERAVRSYKEALLKTYVNGRKAGLAKGLGLGSMHCVLFLSWALLVWFTSVVVHKNIANGGESFTTMLNVVISGLSLGQAAPDISAFIRAKAAAYPIFEMIERDTVSKSSSKTGRKLSKLEGHIQFKDVCFSYPSRPEVAIFNNLCLDIPSGKIVALVGGSGSGKSTVISLIERFYEPLSGQILLDRNDIRELDLKWLRQQIGLVNQEPALFATSIKENILYGKDDATFEELKRAVKLSDAQSFINNLPDRLETQVGERGIQLSGGQKQRIALSRAIVKNPSILLLDEATSALDAESEKSVQEALDRVMVGRTTVVVAHRLSTIRNADVIGVVQGGRIVETGNHEELISNPTSVYASLVQLQDATSLQRLPSVGPSLGRQSSINYSRELSRTTASFGGSFRSDKESIGKVCADEAENASKSKRVSAARLYSMVGPDWFYGVFGTFCAFVAGAQMPLFALGISHALVSYYMDWDTTRHEVKKIAFLFCGAAVITITVHAIEHLSFGIMGERLTLRVREMMFSAILKNEIGWFDDTNNTSSMLSSRLETDATLLRSIVVDRSTILLQNVGLVVTSFIIAFILNWRITLVVLATYPLIISGHISEKLFMKGYGGNLSKAYLKANMLAGEAVSNIRTVAAFCSEDKVLDLYANELVDPSKRSFQRGQIAGIFYGMSQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMGETLALAPDLLKGNQMVASVFEVMDRKSGIMGDNGEELKTVEGTIELKRIHFSYPSRPDVIIFKDFNLRVPSGKSIALVGQSGSGKSSVISLILRFYDPTSGRVLIDGKDITRLNLKSLRKHIGLVQQEPALFATSIYENILYGKEGASDSEVIEAAKLANAHNFISGLPEGYSTKVGERGVQLSGGQRQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALDRLMQNRTTVMVAHRLSTIRNADQISVLQDGMIIEQGTHSSLVENKNGAYFKLVNLQQQQHQQ | 1236 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi2570g00007 | 1236 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 356 | 592 | IPR003439 | GO:0005524 | |
Gabi2570g00007 | 1236 | ProSitePatterns | ABC transporters family signature. | 495 | 509 | IPR017871 | GO:0005524|GO:0016887 | |
Gabi2570g00007 | 1236 | Gene3D | ABC transporter type 1, transmembrane domain | 794 | 989 | IPR036640 | GO:0005524|GO:0016020 | |
Gabi2570g00007 | 1236 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 673 | 959 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Gabi2570g00007 | 1236 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 662 | 977 | - | - | |
Gabi2570g00007 | 1236 | SUPERFAMILY | ABC transporter transmembrane region | 655 | 973 | IPR036640 | GO:0005524|GO:0016020 | |
Gabi2570g00007 | 1236 | Gene3D | ABC transporter type 1, transmembrane domain | 19 | 597 | IPR036640 | GO:0005524|GO:0016020 | |
Gabi2570g00007 | 1236 | SUPERFAMILY | ABC transporter transmembrane region | 19 | 326 | IPR036640 | GO:0005524|GO:0016020 | |
Gabi2570g00007 | 1236 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 32 | 329 | - | - | |
Gabi2570g00007 | 1236 | PANTHER | ABC TRANSPORTER B FAMILY | 4 | 594 | IPR039421 | - | |
Gabi2570g00007 | 1236 | Gene3D | - | 346 | 595 | IPR027417 | - | |
Gabi2570g00007 | 1236 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 348 | 594 | IPR027417 | - | |
Gabi2570g00007 | 1236 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 33 | 321 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Gabi2570g00007 | 1236 | CDD | ABC_MTABC3_MDL1_MDL2 | 992 | 1229 | - | - | |
Gabi2570g00007 | 1236 | CDD | ABC_MTABC3_MDL1_MDL2 | 356 | 594 | - | - | |
Gabi2570g00007 | 1236 | Gene3D | - | 990 | 1234 | IPR027417 | - | |
Gabi2570g00007 | 1236 | Pfam | ABC transporter | 375 | 523 | IPR003439 | GO:0005524 | |
Gabi2570g00007 | 1236 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 992 | 1228 | IPR003439 | GO:0005524 | |
Gabi2570g00007 | 1236 | FunFam | ABC transporter B family member 4 | 346 | 600 | - | - | |
Gabi2570g00007 | 1236 | ProSitePatterns | ABC transporters family signature. | 1131 | 1145 | IPR017871 | GO:0005524|GO:0016887 | |
Gabi2570g00007 | 1236 | FunFam | ABC transporter B family member 2 | 793 | 989 | - | - | |
Gabi2570g00007 | 1236 | Coils | Coil | 1226 | 1236 | - | - | |
Gabi2570g00007 | 1236 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 983 | 1230 | IPR027417 | - | |
Gabi2570g00007 | 1236 | SMART | AAA_5 | 1019 | 1211 | IPR003593 | GO:0016887 | |
Gabi2570g00007 | 1236 | SMART | AAA_5 | 383 | 584 | IPR003593 | GO:0016887 | |
Gabi2570g00007 | 1236 | Pfam | ABC transporter transmembrane region | 33 | 304 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Gabi2570g00007 | 1236 | Pfam | ABC transporter transmembrane region | 674 | 945 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Gabi2570g00007 | 1236 | FunFam | ABC transporter B family member 1 | 19 | 355 | - | - | |
Gabi2570g00007 | 1236 | FunFam | ABC transporter B family member 4 | 982 | 1235 | - | - | |
Gabi2570g00007 | 1236 | Pfam | ABC transporter | 1011 | 1159 | IPR003439 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi2570g00007 | Gabi-Chr2570 | 39626 | 48933 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi2570g00007 | 15 | 1236 | Calmodulin-binding Proteins | AT2G36910 | 50.040 | 0.0 | 1206 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi2570g00007 | K05658 | - | gmx:100819045 | 2221.05 |