Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi256g00004 ATGGAGAAGGACCTTGCTGAGCATTCAGGCAGTTTCGCAGGCAAAGACGAAAACACCAATGTCGACGACATCTCTCATTCACCGGTGCCGGAAACTGCAGATAACATTGGTGCAAAACCGGACAGTGAAACCGAAAAAGCTGCAGATGCAGATCGTGTTCAGGGAGAGCCGAAAGAGGGGGAGGAGGAGGAAGAAGAAACCGTCGTAGCCGTTGAGGTTCCGCCGGAAACTCCTCTTCCTAGCCTGGAGAAGGTTTCAGAAGACATCGATCGATTACTTCTGACTCTGCAACAGAATAATGATGATAACAATAATGCAGATGTCAATGAAGTCTCGTTATTAGAGATCCCTGATTTCGTGGAAAGGTTCTTGGATCTCGTGGAAGAGAAGATTGCCAGGTACGACACAGGCGCAACAAAATCGGGTGAGGTTGTGGAGGAAGATTCATCGTTGCTGGAAGCTGTGAATCGCATTTCAAAGCTGATGAAATTGTTGAGAGAAGAGTCTCAATCTGAAAAAGAAGAGATCAATGGCAAAAACGACTTGTTGGTGAACCGCATTGGCGTCGTTCAACAACGAGCGATGTCGTATTTGGAAGACGAGTTCCGTTTGTTAATGGAAGAATCTGGAAACCACAGCAAATCAGACCCGAAAGGGAAGCACGTGCAGGCAGAACCACCAGAATCCGAACCCGCGGAAACGGTTACGCATTTCCCGGGTTACACGGAGGAAGCCGTTGCAAGTTTGAACAAGATAGCGAGGGAGATGATATCAGGCGGTTACGAATCTGAGTGTTTTCATGATTACACCATTTCGAGAAGGCACGCGCTGGAGGAGAGCGTGCACAAACTAGGCTTCCAGAAATTCACCATCGAAGAGATTCAGAAAATGCAATGGGAAGCACTGGAGAGGGATCACATCCCAACGTGGATCAACACATTTAAGGAATGCGCCGCCGCGTACTTCCCCGGCGAGCGGAAACTGGCGGAGTCCGTCTTCTCGGATCACCCATCCACGGCGGCGAGCCTCTTCAGCAACATCTCTCGCGGCGTGACGATTCAGCTTCTCAACTTCGCTGAAAGCATGTCTATGACAAAGCGTGCGGGGGAGAAGCTCTTCAAACTCCTCGACATGTACGAAACCTTAAGGGATTTGATTCCAAACCTGGACAACCTGTTCCCTGATGATTACGTCAGCGAGCTCAAAGCGGAAACGACGTCGGGTAAGTGCAGACTCGGCGAGGCTGCGATACTCATATTCTGCGATCTTGAAAACTCAATAAAATCCGATACCGGTAAAACCCCGGTAGCCGGTGGCGCGGTTCACCCGCTAACACGCTACATCATGAACTACCTGAGGCTAGCGTGCGAATATAAAGACACATTGGAAGAGGTGTTCAGGGAACACTCGAAGATCGAGCGTGCTGACTCGACAAGTAGGCCCCACTACGAGGAAGAGAAGAAAAACGTCCAAAAAGAAAAGGAAAACGCATCGCCGTTTGCGGCACAGTTAATGAGGGTGATGGAGTTGCTAGACTCGAACCTTGAAGGGAAAGCGAAGCTGTACAAGGAGGTAGCATTAAGCTGCATCTTCATGATGAACAACGGAAGATACATAGTTCAGAAGATCAAAGGTTCTTCGGAGATATACGAGGTAATGGGAGAGACATGGTGTAGGAAAAGATCCACTGAGCTGAGGACATACCATAAGAACTACCAGATAGAAACGTGGAGTAAGATATTGGGTTGTTTAAGCCCGAAAGGGTTGAGTGATAACGGGAAGGTGCAGAAACCGGTGCTGAAGGAGAGGTTCAAGAGCTTCAATGCATTGTTTGAAGAGATACACAAGACGCAGAGCACGTGGGTGGTGAGTGACGAACAGCTTCAATCGGAGCTAAGGGTTTCAATATCGGCGCTCGTGATTCCGGCGTACCGGTCATTTTTGGGGAGGTTTTCTCAGTATTTGGATCCAGGGAGACAAACGGAGAAGTATATTAAGCTTCAAGCTGAGGATGTAGAGAATTACATCGACGAGTTGTTTGATGGGAACCCTCATCATCAGGCCATTGCTAGAAAGAAAGCATGA 2085 0.4859 MEKDLAEHSGSFAGKDENTNVDDISHSPVPETADNIGAKPDSETEKAADADRVQGEPKEGEEEEEETVVAVEVPPETPLPSLEKVSEDIDRLLLTLQQNNDDNNNADVNEVSLLEIPDFVERFLDLVEEKIARYDTGATKSGEVVEEDSSLLEAVNRISKLMKLLREESQSEKEEINGKNDLLVNRIGVVQQRAMSYLEDEFRLLMEESGNHSKSDPKGKHVQAEPPESEPAETVTHFPGYTEEAVASLNKIAREMISGGYESECFHDYTISRRHALEESVHKLGFQKFTIEEIQKMQWEALERDHIPTWINTFKECAAAYFPGERKLAESVFSDHPSTAASLFSNISRGVTIQLLNFAESMSMTKRAGEKLFKLLDMYETLRDLIPNLDNLFPDDYVSELKAETTSGKCRLGEAAILIFCDLENSIKSDTGKTPVAGGAVHPLTRYIMNYLRLACEYKDTLEEVFREHSKIERADSTSRPHYEEEKKNVQKEKENASPFAAQLMRVMELLDSNLEGKAKLYKEVALSCIFMMNNGRYIVQKIKGSSEIYEVMGETWCRKRSTELRTYHKNYQIETWSKILGCLSPKGLSDNGKVQKPVLKERFKSFNALFEEIHKTQSTWVVSDEQLQSELRVSISALVIPAYRSFLGRFSQYLDPGRQTEKYIKLQAEDVENYIDELFDGNPHHQAIARKKA 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi256g00004 694 MobiDBLite consensus disorder prediction 209 227 - -
Gabi256g00004 694 MobiDBLite consensus disorder prediction 1 81 - -
Gabi256g00004 694 Pfam Exo70 exocyst complex subunit 310 678 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gabi256g00004 694 FunFam Exocyst subunit Exo70 family protein 137 688 - -
Gabi256g00004 694 MobiDBLite consensus disorder prediction 209 235 - -
Gabi256g00004 694 MobiDBLite consensus disorder prediction 38 57 - -
Gabi256g00004 694 MobiDBLite consensus disorder prediction 473 495 - -
Gabi256g00004 694 PANTHER EXOCYST COMPLEX PROTEIN EXO70 124 682 IPR004140 GO:0000145|GO:0006887
Gabi256g00004 694 Gene3D Exocyst complex component Exo70 131 689 - -
Gabi256g00004 694 MobiDBLite consensus disorder prediction 473 494 - -
Gabi256g00004 694 Coils Coil 155 175 - -
Gabi256g00004 694 SUPERFAMILY Cullin repeat-like 148 681 IPR016159 -
Gabi256g00004 694 Coils Coil 82 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi256g00004 Gabi-Chr256 77227 79311 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi256g00004 81 694 EXO70 exocyst subunit family AT5G13990 52.542 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi256g00004 K07195 - gmx:100819960 886.715