Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2561g00006 ATGAGATACACTTCATTGCCTAGAAGCCCAAAGGCAGAAGAACAGGAAGTGCCAAATTCTATCACCTCCGTATTACCCAATTCTAAAGAAGCTTATGCTGATGAATATTTCAGTATGTTGGGGGAACTCGAAGGGGTCTTGGGCATTGAAGAAGAACAAAAATTACCACCATCACAGGAAACTTGTAGTGTTCAGCTTCATTGGGATTTCATGGAAAGGGAGGAATTTCGTTCCATTGAAGAGGAACCAGAAGATGATGAAGGGAAAGTGCAGGTAACTGAGAACAAAAGCAAGTACCTTTTCAGAGAGCAGCAGATAAAGAGAGAAAATATTTTTGGGTTTTGGGAAGTGGATGAAGAAAAGATGATGGCTTTGAATTTGAACTTGAACTATCAAGAGGTTCTGGATGCATGGTCTGACCGTGGTTCTCTATGGGCTGAAGATTGTTCTCTTTCATTGGCCAACAATAATGGCTACTATATGGGAGAAGTGCCAATATTGGAAGAAGAGAGAACAAGAAGGGAAGCAAGTGTTCTTAGGTACAAAGAGAAGCGCCAGAACAGATTGTTCTCCAAGAAGATAAGATACCAAGTTCGGAAACTAAACGCTGATAAAAGACCCAGAATCAAGGGTCGCTTTGTGAAGAGACATTGA 654 0.4113 MRYTSLPRSPKAEEQEVPNSITSVLPNSKEAYADEYFSMLGELEGVLGIEEEQKLPPSQETCSVQLHWDFMEREEFRSIEEEPEDDEGKVQVTENKSKYLFREQQIKRENIFGFWEVDEEKMMALNLNLNYQEVLDAWSDRGSLWAEDCSLSLANNNGYYMGEVPILEEERTRREASVLRYKEKRQNRLFSKKIRYQVRKLNADKRPRIKGRFVKRH 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2561g00006 217 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 11 216 - -
Gabi2561g00006 217 MobiDBLite consensus disorder prediction 1 22 - -
Gabi2561g00006 217 ProSiteProfiles CCT domain profile. 174 216 IPR010402 GO:0005515
Gabi2561g00006 217 Pfam CCT motif 174 216 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2561g00006 Gabi-Chr2561 94649 96013 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2561g00006 118 216 C2C2-CO-like Transcription Factor Family AT1G73870 46.610 4.69e-21 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi2561g00006 CCT 2.1e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2561g00006 - - aprc:113847792 281.952