Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2559g00020 ATGGAAATTAACATCATATCAAGAAAAACCATTAAACCATCATTGCCTACTCCTAATGAACGCAAAACCTACAAACTATGTTTGTTTGATGTGTTTCAACTCAACACATATTTTCCACTGATCTTATTCTACAGTAAAACCAATGACATGCAAGGATTCTCATACATCTCAGATCAATTGAAGAAATCACTATCTGAGGCACTAACCATTTTCTACCCTCTTGGAGGTAGAAGAAGTGACATCTTCTCCATAGATTGCAATGATGAAGGTGCAATTTACATTGAAGCCTCAGTGAATATCAACATAGAAGAGTTCCTAAAACCACCAAAACTAGAATTACTATACAAATTGCTTCCTTGTGAGCCAAACAAGATACAACCCCACCAACAAGCCTTGCCCCAGTTGCTAGTTCAAGTGAACAAATTCAAGTGTGGAGGAATAGCTATTGGCTTGTGCAATCTCCACACTCTCTTAGATGCATGCTCTTGTAGTACCCTTTTGAAAACTTGGTCTTCCATTTGTAAAGGATCAAGGGAAGAAATATCATGGCCTGATTTCTCTTCTGCTTCTAATAGCTTTCCTCCAAGGAACACCTTTGGTGTGCGTGCTGGTGTGATGAATATTAACAAAGGCTTAGAGATAGAAACAAAATGCACCACAAGCAGATTCTTGTTTGATAACAGAACCATTAATGACCTTAAAGCCAAGTTAGAAAATGATGGAACCAACACAAAACTACCTATTACACGTTACCAAGTAGTGTCTTCATTGATTTGTAAACACATGATTGTAGCATGCAATATGGAGGAACCTTGTGATCATAGAACAAGGCCAGTGGTAGTGTTGCATGTTGTGGACATGAGGAGAAGGATGGGAGAGCCTTTCTCACAAGATTCTATTGGAAACTTATTGTGGCCTGCAGTGTTGCTTTATGAGAATGTTAATAGGGACACTGATATAAGATATTTGGTTAGAATTTTGGAAGAAGAAATTGGAAAGCTTACAAAGGAATTGTTTCTGAAAGTGCAAAATGATCCTAGTTTTCTGTGGAGTGATGAGTGTGCAGAGCTAATGCTTGAAGGGATAGAGACCAAGAATCCAATTTCGTTTGTGTTCACAAGTTGGGCTAATATGGGATTCAATGAGTTGAACTTTGGTTGGGGAAAGCCTTTGTGGTTGGCTCAAAAAGGAGGTACTAAAGAAACTATTCCAAATTCAGTACTGTTGATGGAAACAGATGAGGGAATAGAGGCATGGGTGACAATGACAGAGAAACATATGGCTATCTTGGAAAATGATAAGGACTTCCTCAGATTAGCGTTGCTAAATCCTAGTTTTTCAAACTTATAG 1350 0.3822 MEINIISRKTIKPSLPTPNERKTYKLCLFDVFQLNTYFPLILFYSKTNDMQGFSYISDQLKKSLSEALTIFYPLGGRRSDIFSIDCNDEGAIYIEASVNINIEEFLKPPKLELLYKLLPCEPNKIQPHQQALPQLLVQVNKFKCGGIAIGLCNLHTLLDACSCSTLLKTWSSICKGSREEISWPDFSSASNSFPPRNTFGVRAGVMNINKGLEIETKCTTSRFLFDNRTINDLKAKLENDGTNTKLPITRYQVVSSLICKHMIVACNMEEPCDHRTRPVVVLHVVDMRRRMGEPFSQDSIGNLLWPAVLLYENVNRDTDIRYLVRILEEEIGKLTKELFLKVQNDPSFLWSDECAELMLEGIETKNPISFVFTSWANMGFNELNFGWGKPLWLAQKGGTKETIPNSVLLMETDEGIEAWVTMTEKHMAILENDKDFLRLALLNPSFSNL 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2559g00020 449 Pfam Transferase family 1 436 - -
Gabi2559g00020 449 Gene3D - 215 438 IPR023213 -
Gabi2559g00020 449 Gene3D - 1 203 IPR023213 -
Gabi2559g00020 449 PANTHER F21J9.9 4 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2559g00020 Gabi-Chr2559 344940 346289 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2559g00020 1 431 Monolignol Biosynthesis Gene Families AT5G48930 24.342 1.55e-21 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2559g00020 - - gmx:102667966 660.603