Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2559g00012 ATGGAGAGCTCGGAGAAAGTGGTTGCTGTGATTATGGTGGGTGGACCCACTAAAGGAACCAGATTTCGGCCTCTTTCCTTTAATACTCCTAAACCCCTTTTCCCTTTGGCTGGCCAGCCAATGGTTCATCATCCTATTTCTGCTTGTAAAAAGATACCCAATTTGGCTCAAATATATCTTCTTGGGTTCTATGAGGAGCGAGAATTCGCTCTATATGTCTCTTCAATTTCAAATGAGCTGAAATTACCAGTAAGATACTTGAAGGAGGATAAACCACATGGTTCAGCAGGTGGTCTTTACTACTTCAGAGATATTATCATGGAAGACAACCCATCGCATATCTTTCTGCTAAATTGTGATGTTTGCTGTAGTTTTCCGCTACCATCCTTGCTTGATGCCCATAAAAGATATGGTGGGATGGGGACAATGTTGGTTATCAAGGTTTCAGCTGAATCTGCTAGCCAGTTCGGTGAGTTGATTGCTGATCCAACCACTAATGAATTGCTGCATTATACTGAGAAACCTGAGACATTTGTTAGTGATTTGATAAATTGCGGTGTCTACATTTTCACACCTGATATTTTTTCTGCCATCCAAGATGTATCTATGAACCGAGAAGGCAGAGCTAATCTACGTCGTCTCTCCAGCTTTGAAGCACTCCAATCAGCCACAAGGACTCTTCCTGTAGATTTTGTAAGACTGGATCAAGATATATTATCACCTCTAGCTGGAAAGAAGCAACTGTATACATATGAGACAATGGATTTCTGGGAGCAAATTAAAACTCCAGGAATATCTTTGAAATGCTCGGAGTTGTATCTTGCTCAGTTCCGAAATACTTCACCCAATCTTTTGGCCAGTGGAGATGGTAAAAGAAATGCCAAAGTTGTTGGTGATGTATTTATCCACCCATCTGCTAAAGTTCATCCATCTGCAAAGATTGGTCCAAATGTTTCTATCTCAGCAAATGTTCGTGTCAGTGCTGGCGTCAGGTTAATCAGTTGTATCATCTTGGATGATGTTGAAATTAAGGAAAATGCTGTAGTTATAAATTCTATTGTTGGATGGAAGTCATCAATGGGAAGATGGTCACGGGTTCAGGCTGATGGTGACTACAATGCAAAGCTTGGCACAACCATCCTAGGAGAAGCTGTGACAGTTGAAGATGAGGTGGTGGTGATCAACAGCATTGTTCTTCCCCATAAGACTCTTAATGTCAGTGTGCAAGAAGAAATCATATTATAA 1245 0.4096 MESSEKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMVHHPISACKKIPNLAQIYLLGFYEEREFALYVSSISNELKLPVRYLKEDKPHGSAGGLYYFRDIIMEDNPSHIFLLNCDVCCSFPLPSLLDAHKRYGGMGTMLVIKVSAESASQFGELIADPTTNELLHYTEKPETFVSDLINCGVYIFTPDIFSAIQDVSMNREGRANLRRLSSFEALQSATRTLPVDFVRLDQDILSPLAGKKQLYTYETMDFWEQIKTPGISLKCSELYLAQFRNTSPNLLASGDGKRNAKVVGDVFIHPSAKVHPSAKIGPNVSISANVRVSAGVRLISCIILDDVEIKENAVVINSIVGWKSSMGRWSRVQADGDYNAKLGTTILGEAVTVEDEVVVINSIVLPHKTLNVSVQEEIIL 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2559g00012 414 Gene3D Hexapeptide repeat proteins 284 411 - -
Gabi2559g00012 414 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 8 414 - -
Gabi2559g00012 414 Pfam Nucleotidyl transferase 9 217 IPR005835 GO:0009058
Gabi2559g00012 414 SUPERFAMILY Nucleotide-diphospho-sugar transferases 7 356 IPR029044 -
Gabi2559g00012 414 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 276 IPR029044 -
Gabi2559g00012 414 FunFam Putative GDP-mannose pyrophosphorylase 283 411 - -
Gabi2559g00012 414 FunFam Mannose-1-phosphate guanyltransferase alpha 6 277 - -
Gabi2559g00012 414 CDD M1P_guanylylT_A_like_N 9 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2559g00012 Gabi-Chr2559 214352 220105 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2559g00012 1 200 Eukaryotic Initiation Factors Gene Family AT2G34970 22.458 1.29e-06 48.9