Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2559g00006 ATGGATTTAGTTCTAAATTACCTAAACACTACAGCAATTGGACTCCTTTCTCTAATGATCTTGTGTTTCTTCATGCTATATCGTCCCTCCAAAGTTGATCATAGTAGAGAGGCTCCAACAGTGAAAGGTGCATGGCCTATACTTGGTCACCTTCCATTGTTGAGTGGTTCAAAGACACCCCATAGAACATTGGGTGCCATGGCTGATAAATATGGACCACTATTCACCTTAAAGCTTGGTTCCACACCAACTGTGGTACTCAGCAATTGGGAAATGGCTAAAGAATGTTTCACCACAAACGACATGGCCGTTTCATCTCGACCAAAAATTGTTGCAGTTGAACACATGAGTTACAACCAAGCCATGTTTGGTTTTGCACCCTATGGTCCTTATTGGCGTGAACTACGTAAGGTTGCAACTCTACAGATCCTCTCAAGTCGCAGAGTTGATCAACTACGAGATTTTCGTGTGTTGGAAGTTCAAACATCGATTAAAGAGCTATTCAATGTTTGGTGCAAAAGAAGGAACGAGGGTGACTATGTGTTGGTGGATATGAAGCAGTGGTTTTCTCAGTTAACTTTCAACATGATTCTTAGAATGGCCATTGGGAAGAGATATTTCGGTGCTGAGACTATGATTGATGAGAATGAAGGACAGAGATGTATTAAGGTTTTCAGAGAGTTCATGCGTTTGATGGGGGAATTCCCTGTGGGAGATGCTATTCCTTATCTGAGATGGTTTGATTTCGGTGGCCATGAGAAGGCTATGAAGGAAACTGCAAAGGAATTCGATAGAATTTTAGGTGAGTGGTTAGAGGAACACTGCAAGAACAGGACTTTGGATGAAAAGGTTGATCGTGATCAAGATTTGATGGACGTGATGCTTTCAGAGCTTGATGGAACAACAATTGATGGGTTTGATGCTAATTCCATAATCAAAGCCACAATATTGACATTAATTTTGGGAGGGACTGACACGAGCAGTGTTACTCTTATATGGGCAGTATCTTTGATATTGAGAAATCCTCTTATATTGGAAAAGGCAAAAGCAGAACTTGACACACAAGTTGGGAAAAAGAGAAATGTTAGTGAGTCAGATATAAGTAAACTAATATACCTTCAAGCCATAGTCAAAGAAACACTAAGATTGTATCCACCAGGTCCTCTATCAGCACCTCGTGAATTCATAAACGATTGCACTTTGGGTGGCTATGTTGTCAAAAAGGGTACTCGACTAATCACAAATCTTTGGAAGATTCACACTGACCCTAATGTTTGGTCAGATCCAATGGAATTCAAACCAGAAAGGTTTCTTACAACTCATAAAGATGTTGATTTTATGGGTCATCATTTTGAGTTGTTACCATTTGGAAGTGGTAGAAGAATTTGTCCAGGAATATCATTTGCCCTACACGTTGTTCATTTATCTCTGGCTAGTTTTTTGCATTCCTTTGAAACCCTGAACTCATCTTCTGAACCTATTGACATGACTGAATCCTTTGGATTGACCAACATCAAAGCTTCTCCACTTGAGATTATGGTTAAACCGCGTTTGTCTCCCAACTGTTATGAAACCTTGTAA 1581 0.3997 MDLVLNYLNTTAIGLLSLMILCFFMLYRPSKVDHSREAPTVKGAWPILGHLPLLSGSKTPHRTLGAMADKYGPLFTLKLGSTPTVVLSNWEMAKECFTTNDMAVSSRPKIVAVEHMSYNQAMFGFAPYGPYWRELRKVATLQILSSRRVDQLRDFRVLEVQTSIKELFNVWCKRRNEGDYVLVDMKQWFSQLTFNMILRMAIGKRYFGAETMIDENEGQRCIKVFREFMRLMGEFPVGDAIPYLRWFDFGGHEKAMKETAKEFDRILGEWLEEHCKNRTLDEKVDRDQDLMDVMLSELDGTTIDGFDANSIIKATILTLILGGTDTSSVTLIWAVSLILRNPLILEKAKAELDTQVGKKRNVSESDISKLIYLQAIVKETLRLYPPGPLSAPREFINDCTLGGYVVKKGTRLITNLWKIHTDPNVWSDPMEFKPERFLTTHKDVDFMGHHFELLPFGSGRRICPGISFALHVVHLSLASFLHSFETLNSSSEPIDMTESFGLTNIKASPLEIMVKPRLSPNCYETL 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2559g00006 526 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00006 526 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00006 526 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00006 526 CDD CYP82 72 517 - -
Gabi2559g00006 526 Pfam Cytochrome P450 41 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00006 526 SUPERFAMILY Cytochrome P450 44 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00006 526 PANTHER CYTOCHROME P450 82C3-RELATED 16 523 - -
Gabi2559g00006 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Gabi2559g00006 526 Gene3D Cytochrome P450 25 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00006 526 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00006 526 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00006 526 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00006 526 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00006 526 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00006 526 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00006 526 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00006 526 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00006 526 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00006 526 FunFam Cytochrome P450 82C4 28 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2559g00006 Gabi-Chr2559 145579 147667 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2559g00006 15 523 Cytochrome P450 AT4G31940 49.323 0.0 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2559g00006 - - gmx:100805047 775.393