Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2559g00005 ATGGATTTAGTTCTAAATTACCTAAACACTACAATAATTGGACTCCTTTCTCTAATCATCTTGCGTTTGTTCATACTATGTCGTCCTTCCAAAGTTGATCATAGTAGAGAGGCTCCAATAGTGGAAGGTGCATGGCCTATATTTGGTCATCTTCCATTAATGTTGAGTGGTTCAAATTCAACGACACCCCATAGAACATTGGGTGCCATGGCTGACAAATGTGGACCACTATTCACCATAAAGCTTGGTTCCACACCAACTTTGGTACTCAGCAATTGGGAAATGGCTAAAGAATGCTTCACCACAAACGACATGGCCGTTTCATCTCGACCAAAACTTGTTGCAGTTGAACACATGAGTTACAACCAAGCCGTGTTTAGTTTTGCACCCTATGGTCCTTATTGGCGTGAACTGCGTAAGGTTGCAACTCTAGAGATCTTCTCAAGTCGCAGAGTTGATCAACTACGAGATTTTCGTGTGTTGGAAGTTCAAACATCGATTAAAGAGCTTTTCAATGTTTGGTGCAAAAGAAGGAACGAATGTAACTATGTGTTGGTGGATATGAAGCAGTGGTTTTTTCAGTTAACTTTCAACATGGTTCTTCGAATGGCCGTTAGGAAGAGATATTTTGGTGATGAGACTGGTGTTGATGAGAATGAAGGACAGAGATGTATAAAGGCTTTGAGAGAGTTCATGCGTTTGACGGGGGAATTCACTGTGGGAGATGCTATTCCTTATCTGAGATGGTTTGATTTCGGTGGCCATGAGAAGGCTATGAAGGAAACTGCAAAGGAATTCGATAGAATTTTAGGTGAGTGGTTAGAGGAACACTGCAAGAACAGGACTTTGGATGAAAAGGTTGATCGTGATCAAGATTTGATGGACGTGATGCTTTCAGTGTTTGATGGAACAACAATTGATGAGTTTGATACTAATACCGTAATCAAAGCCACAATATGGACATTAATTGTGGGAGGAACTGACACAAGCAGTGTTACTCTTACATGGGCATTATCTTTGATATTGAGAAATCCTCTTATATTGGAAAAGGCAAAAGCAGAACTTGACACACAAGTTGGGAAAGAGAGAAGTGTTAGTGAGTCAGATATAAGTAAACTAGTATATCTCCAAGCTATAGTCAAAGAAACACTAAGATTGTATCCACCAGCTCCTCTATCGGGACCTCGTGAATTCATAAACAATTGCACATTGGGTGGCTATGATGTTAAAAAGGGAACTCGATTAATCACAAATCTTTGGAAGATTCACACTGACCCTAATGTGTGGTCAGATCCAATGGAATTTAAACCAGAAAGGTTCCTTACAACTCATAAAGATATTGATGTTAGGGGTCATCATTTTGAGTTGTTACCATTTGGAAGTGGTAGAAGGATGTGTCCTGGAATATCCTTTGGCCTACACATTGTTCATTTAACTCTGGCCAGTTTTTTGCATTCCTTTGAAATCTTGAACCCATCTTCTGAACCTATTGACATGACTGAATCCTTTGGATTGAGCAATGTCAAAGCTTCTCCACTTGAGATTATGGTTAAACCGCGTTTGTCTCCCAATTGTTACGAAACTATGTAA 1590 0.3981 MDLVLNYLNTTIIGLLSLIILRLFILCRPSKVDHSREAPIVEGAWPIFGHLPLMLSGSNSTTPHRTLGAMADKCGPLFTIKLGSTPTLVLSNWEMAKECFTTNDMAVSSRPKLVAVEHMSYNQAVFSFAPYGPYWRELRKVATLEIFSSRRVDQLRDFRVLEVQTSIKELFNVWCKRRNECNYVLVDMKQWFFQLTFNMVLRMAVRKRYFGDETGVDENEGQRCIKALREFMRLTGEFTVGDAIPYLRWFDFGGHEKAMKETAKEFDRILGEWLEEHCKNRTLDEKVDRDQDLMDVMLSVFDGTTIDEFDTNTVIKATIWTLIVGGTDTSSVTLTWALSLILRNPLILEKAKAELDTQVGKERSVSESDISKLVYLQAIVKETLRLYPPAPLSGPREFINNCTLGGYDVKKGTRLITNLWKIHTDPNVWSDPMEFKPERFLTTHKDIDVRGHHFELLPFGSGRRMCPGISFGLHIVHLTLASFLHSFEILNPSSEPIDMTESFGLSNVKASPLEIMVKPRLSPNCYETM 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2559g00005 529 SUPERFAMILY Cytochrome P450 44 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00005 529 Pfam Cytochrome P450 43 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00005 529 FunFam Cytochrome P450 82C4 28 518 - -
Gabi2559g00005 529 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00005 529 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00005 529 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00005 529 CDD CYP82 75 520 - -
Gabi2559g00005 529 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00005 529 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00005 529 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00005 529 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00005 529 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00005 529 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00005 529 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00005 529 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00005 529 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00005 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Gabi2559g00005 529 PANTHER CYTOCHROME P450 82C3-RELATED 17 526 - -
Gabi2559g00005 529 Gene3D Cytochrome P450 26 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2559g00005 Gabi-Chr2559 87081 91470 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2559g00005 8 526 Cytochrome P450 AT4G31940 47.909 1.06e-177 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2559g00005 - - gmx:100805047 751.51