Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2559g00002 ATGTGTTTGCTATTGAGAAATCCTCTTACATTGGAAAAAGCTAAAGAAGAACTTAACACACATCTTGGGAAAGAGAGATGTGTTAGTGAATCAGATATAAATAAACTAGTATATCTTCAAGCTATAGTTAAAGAGACTCTAAGATTGTATCCACCAGCCACTATCTCATCACCCCGTGAATTCACAGAGAATTGCACTATAGGTGGCTACCATGTTAGAAAGGGAACTCGACTAATGCCAAACCTATGGAAGATCCACAGAGACCCTAGTGTTTGGTCAGATCTATTGGAGTTCAAACCAGAAAGGTTCCTTACCACTCACAAAGAGGTTGATGTTAAGGGTCATCATTTTGAGTTGTTACCATAAAGTGGCAGAAGGATTTGTGCTGGAATGTCCCTTGGCTTGAGTATTGTTCATTTCACTTTGGCCAGTTTTTTGCATTCCTTTGATATCTTAAATCCATCTATCGAACCTATTGATATGACTGAATCCTTTGAATTTACCAACACCAAAGCTACCCCACTTGAGATTATAGTTAAACCATGTTTGTCTCCCAACTGTTATGAAACTATGTGA 576 0.3802 MCLLLRNPLTLEKAKEELNTHLGKERCVSESDINKLVYLQAIVKETLRLYPPATISSPREFTENCTIGGYHVRKGTRLMPNLWKIHRDPSVWSDLLEFKPERFLTTHKEVDVKGHHFELLPFXSGRRICAGMSLGLSIVHFTLASFLHSFDILNPSIEPIDMTESFEFTNTKATPLEIIVKPCLSPNCYETM 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2559g00002 192 PRINTS P450 superfamily signature 120 129 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00002 192 PRINTS P450 superfamily signature 41 52 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00002 192 PRINTS P450 superfamily signature 129 140 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00002 192 PRINTS P450 superfamily signature 6 19 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00002 192 PRINTS E-class P450 group I signature 81 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00002 192 PRINTS E-class P450 group I signature 119 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00002 192 PRINTS E-class P450 group I signature 129 152 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00002 192 PRINTS E-class P450 group I signature 40 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00002 192 SUPERFAMILY Cytochrome P450 1 182 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00002 192 PANTHER CYTOCHROME P450 82C3-RELATED 1 189 - -
Gabi2559g00002 192 Gene3D Cytochrome P450 1 182 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2559g00002 192 Pfam Cytochrome P450 3 164 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2559g00002 Gabi-Chr2559 61937 62540 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2559g00002 1 189 Cytochrome P450 AT4G31970 52.105 1.59e-65 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2559g00002 - - gmx:100789386 316.235