Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2556g00030 ATGGGAGAAGAGTTTGCTATGGTGGTTGTGAGTGTGAGAGAGTTCAACCCAAATAAAGACAGAGAAAGAGTGGAAGGCGTTGAAAGAATCTGTGAGGTTGGACCCAGTGGGAAGCTTTCCCTCTTCACTGACCTCCAAGGAGACCCAATTTGCAGGGTCCGCAATTCACCTACTTTCCTCATGCTGGTAGCTGAGATAGGTGAAGACATAGTCGGAATGATAAGGGGTTGTATCAAAACCGTTACATGCGGAAAGAGGCTCTACAGACAAGGAAAAAACACCACCTTCACCCACACCAATTCCACCACTAACAACAACATTGAAACTATTGAAGCCACTACCAAACAAGTCCCTGTGTACACAAAACTCGCCTACATATTAGGCCTCCGCGTTTCTCCTTCTCACAGGAGAATGGGAATAGGGTTGAAACTTGTGCAAGGAATGGAGGAATGGTTCAGAGAAAACGGAGCTGAGTACTCATACATAGCAACGGAAAAGGATAACGTGGCATCCGTTAAGCTCTTCAACGAAAAATGCGGCTACTCAAAGTTCCGTACACCGTCGATTCTTGTAAACCCTGTTTTCGCTCACCGAGTCAGGACCTCACCCAAGGTTACCGTTATTCAGTTAACCCCAAAAGACGCTGAGTCACTCTACCGTAACCGATTCGCCACCACCGAGTTCTTTCCCCGCGACATTGACTCGGTCCTCAACAATAACCTCAGCCTCGGCACTTTTCTCGCCGTCCCGACCGGCTCATACCGGCCCGACACCTGGCCCGGTTCGGACCGGTTCCTTTCAGACCCACCGCAATCCTGGGCCGTGGTCAGCGTTTGGAACTGCAAAGATGTGTTCACGCTCGAGGTGAAGGGCGCGTCGCGCGTGAGGCGGGCTTTGGCTAAGACGACCCGGGTGCTGGACCGGGCTTTCCCTTGGCTTCGGTTGCCGTCGATTCCAAACCTCTTCAGGCCGTTCGGGTTTCACTTTATGTATGGGCTTGGAGGGGAAGGCCCAGAGGGGTCGAAGATGGTGAGTGCCCTTTGTGGGTTCGCGCATAACCTCGCGAAGGACCGTGGGTGCGGGGTGGTTGCAACCGAAGTCTCGAGCCGCGAACCGCTCCGGTTCGGTATACCGCACTGGAAGGTGCTATCTTGTGAAGAGGATTTATGGTGCATAAAGAGGCTTGGGGAAGATTATAGTGATGGGTCGGTAGGGGATTGGACCAAATCTCCACCTGGATTCTCAATTTTTGTTGATCCCAGAGAGTTCTAA 1272 0.5189 MGEEFAMVVVSVREFNPNKDRERVEGVERICEVGPSGKLSLFTDLQGDPICRVRNSPTFLMLVAEIGEDIVGMIRGCIKTVTCGKRLYRQGKNTTFTHTNSTTNNNIETIEATTKQVPVYTKLAYILGLRVSPSHRRMGIGLKLVQGMEEWFRENGAEYSYIATEKDNVASVKLFNEKCGYSKFRTPSILVNPVFAHRVRTSPKVTVIQLTPKDAESLYRNRFATTEFFPRDIDSVLNNNLSLGTFLAVPTGSYRPDTWPGSDRFLSDPPQSWAVVSVWNCKDVFTLEVKGASRVRRALAKTTRVLDRAFPWLRLPSIPNLFRPFGFHFMYGLGGEGPEGSKMVSALCGFAHNLAKDRGCGVVATEVSSREPLRFGIPHWKVLSCEEDLWCIKRLGEDYSDGSVGDWTKSPPGFSIFVDPREF 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2556g00030 423 Gene3D - 46 187 - -
Gabi2556g00030 423 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 56 186 IPR016181 -
Gabi2556g00030 423 CDD NAT_SF 112 159 - -
Gabi2556g00030 423 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 10 200 IPR000182 GO:0016747
Gabi2556g00030 423 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 9 423 - -
Gabi2556g00030 423 FunFam Probable N-acetyltransferase HLS1-like 19 188 - -
Gabi2556g00030 423 Pfam Acetyltransferase (GNAT) family 56 181 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2556g00030 Gabi-Chr2556 255602 257387 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gabi2556g00030 Acetyltransf_1 1.4e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2556g00030 - - gmx:100775317 682.559