Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2556g00024 ATGAAATTTCATCATTTGAGCTTCTTTTTGATTCTATCATCATTCACTGCACTCACTCCACTCCCCACAGTTCAATTCCCCAATCCCAATGACTCCCACACTAGAAGGATCCTACACCAACCCTTGTTTCCGGCGAGTTCTGCTCCGCCGCCAGCCACTCCTCCGCCGCCGCAGCCGGAGGAAACCCCTTCGTCTCCCGACATTCCTTTCTTCAACGAGTATCCAGCAGCGCCGCCACCGCCGGACCTGAACCTGTCGCCGCCGTCAACCTCCAACAACACAACCGCGAATTACCCGACGGCAACGCAACCCACGAAGCCGACGAAGAAAGTTGCGATTGCGATCTCCGTGACGATCGTGACGGTGGGGATGTTCTCCGCATTCGGCTTCTTCTTGTACAAACACAGAGCGAAGCACCACGCGGAGACACAGAAGCTAGTGAGTGGTGGAAACTCTCGGAGGGTTCTAGAAGATTCTCCGAGGGCCCCACCTCCCTCGAGCTTCCTCTACATTGGGACTGTGGAGCCCAGCAGAACGTCGGTGAGCGAAGCCAATGGTGCAGACAGGTCACCTTATCACAAGCTCAATTCCGTTAAGCTGAATTCGGATCATCGTTACAGGCCAAGTCCCGAGTTGCAACCATTGCCGCGGCTGAGCAAGCCCCCAGCCGACGAGACCCAATCGCCGCCGGCGGCCTCCTCGTCTTCGTCATCGTCGGACGAGGAAAGCCGCGAGACGGCGTTTCATTCGCCGCATGGGTCCTCGTCTCTCAGCCACGAGGATAGCTACTACACGCCGGTTTCTCGCCTTGCCAACGGTAGCCCCGCCGCACCGGCCGTCGCTGCTCCGGTGGTTCCTTTCTCCAAGAGAACCTCGCCTAAATCTCGGTTTTCTGCTTCGTCGCCGGATATCAGGCACGTCATCATGCCATCCGTAAAGCATTCTCAGCCGCCGGCGCCGCCACCGCCACCGCCACTACCTTCAATTCAACATCTGCATATGGAGATAGAAGTGAAACCCGATCGTTCCAGAAGGCCGAAATTCTCATCGCCTCCCCCAGCACCGAATTTGACGCATCTTCATACAAACATATATAATACTTCACTTAAACCTCCTCCTCCTCCGCCTCCACCGCCACCGCCACGAAAGGGTTGGTCTCCGGCAATAAGTGTATCGTCTTCCTCTTCTCCAAGAAAGCAGCGACGGTCTTGGTCTCCTAATCAAGAAGTGGGTTCTGGTAACAGTGTGAGTGTGACGAAAGCTTCAGAGGAAGTTGATGACATGGATGGAGCTAAACCCAAGTTGAAGGCTCTGCATTGGGATAAAGTGCGTGCTACCTCAGACCGCGCCACTGTGTGGGACCAGTTAAAATCAAGCTCCTTTCAGTTAAATGAGGACATGATGGAGACCCTGTTTGGTTGCAATTCCACAAATTCTGCCCCTAAAGAGGCTGTTACTAGAAAATCAGTTCTTCCCACTGTTGAAAAGGAGAATAGAGTGTTGGACCCCAAGAAATCCCAAAACATAGCTATACTACTCAGGGCACTGAATGTGACAAGAGATGAGGTGTCCGAAGCTCTTTTAGATGGGAATCCTGAAGGTTTGGGTGCTGAGCTATTGGAAACTCTAGTAAAGATGGCTCCAACAAAGGAAGAAGAGATAAAACTTAAAAAATATGATGGTGACCTTTCAAAACTTGGGTCTGCAGAGAGATTTCTCAAAGCAGTGCTTGATGTACCTTTAGCTTTTAAAAGAGTTGAAGCCATGCTGTACAGAGCTAATTTTGAAACAGAAGTTAAATACCTTAGAAAGTCCTTTCAAACCCTGGAGGCAGCAAGTGAGGAATTAAAGAACAGCCGGTTATTCCTCAAACTTCTTGAAGCTGTTCTCAGGACAGGAAACAGAATGAATGTTGGCACCAATCGTGGGGATGCTAAATCTTTCAAACTGGACACACTCCTAAAACTTGTGGATATAAAGGCAACAGATGGAAAGACCACATTACTCCACTTTGTGGTCCAAGAGATCATTAGATCTGAAGATACAGGTTGTGAATCTGCAAATGAGAATGTTCAAAACCAAACGAATTCCCAATTCAATGATGATGAGTTCACAAAGAAAGGACTGCAGGTTGTGGCTGGATTGAGCAGAGACCTTGGTAATGTTAAAAAGGCAGCGGGAATGGACTTGGATGTCTTAAGCAGCTATGTCTCAAAGCTTGAAATGGGGCTTGATAAAGTGAGGTTGGTTTTGCAATATGAAAAGCCAGATATGCAAGGGAATTTCTTTAACTCGACAAAGATATTTCTGAAAGATGCCGAAAAGAAAATTGACTGGATCAAGGCTGATGAACGGAAGGCCTTATTCCTGGTAAAAGAAGTTACAGAGTACTTTCATGGGGATACAGCAAAGGAAGAAGCGCACCCTTTCAGAGTTTTTATGGTTGTAAGAGACTTTCTAAATATTTTGGATCAAGTATGCAAAGAAGTGATGCAGGATAGAACTGTGATTAGTTCAGCCAGATCCTTCAGGATAGCTGCAAGTGCATCATTACCTGTGCTCAACAGGTACCATGCAAGACAAGATAGAAGTTCAGATGAGGAAAGCTTATCCCCCTAG 2619 0.4853 MKFHHLSFFLILSSFTALTPLPTVQFPNPNDSHTRRILHQPLFPASSAPPPATPPPPQPEETPSSPDIPFFNEYPAAPPPPDLNLSPPSTSNNTTANYPTATQPTKPTKKVAIAISVTIVTVGMFSAFGFFLYKHRAKHHAETQKLVSGGNSRRVLEDSPRAPPPSSFLYIGTVEPSRTSVSEANGADRSPYHKLNSVKLNSDHRYRPSPELQPLPRLSKPPADETQSPPAASSSSSSSDEESRETAFHSPHGSSSLSHEDSYYTPVSRLANGSPAAPAVAAPVVPFSKRTSPKSRFSASSPDIRHVIMPSVKHSQPPAPPPPPPLPSIQHLHMEIEVKPDRSRRPKFSSPPPAPNLTHLHTNIYNTSLKPPPPPPPPPPPRKGWSPAISVSSSSSPRKQRRSWSPNQEVGSGNSVSVTKASEEVDDMDGAKPKLKALHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLFGCNSTNSAPKEAVTRKSVLPTVEKENRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEGLGAELLETLVKMAPTKEEEIKLKKYDGDLSKLGSAERFLKAVLDVPLAFKRVEAMLYRANFETEVKYLRKSFQTLEAASEELKNSRLFLKLLEAVLRTGNRMNVGTNRGDAKSFKLDTLLKLVDIKATDGKTTLLHFVVQEIIRSEDTGCESANENVQNQTNSQFNDDEFTKKGLQVVAGLSRDLGNVKKAAGMDLDVLSSYVSKLEMGLDKVRLVLQYEKPDMQGNFFNSTKIFLKDAEKKIDWIKADERKALFLVKEVTEYFHGDTAKEEAHPFRVFMVVRDFLNILDQVCKEVMQDRTVISSARSFRIAASASLPVLNRYHARQDRSSDEESLSP 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2556g00024 872 MobiDBLite consensus disorder prediction 368 385 - -
Gabi2556g00024 872 ProSiteProfiles Formin homology-2 (FH2) domain profile. 425 849 IPR015425 -
Gabi2556g00024 872 SUPERFAMILY Formin homology 2 domain (FH2 domain) 371 833 - -
Gabi2556g00024 872 MobiDBLite consensus disorder prediction 87 107 - -
Gabi2556g00024 872 SMART it6_source 425 838 IPR015425 -
Gabi2556g00024 872 MobiDBLite consensus disorder prediction 314 329 - -
Gabi2556g00024 872 Pfam Formin Homology 2 Domain 431 823 IPR015425 -
Gabi2556g00024 872 MobiDBLite consensus disorder prediction 44 64 - -
Gabi2556g00024 872 MobiDBLite consensus disorder prediction 226 241 - -
Gabi2556g00024 872 MobiDBLite consensus disorder prediction 172 186 - -
Gabi2556g00024 872 PANTHER FORMIN-RELATED 9 866 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gabi2556g00024 872 MobiDBLite consensus disorder prediction 42 107 - -
Gabi2556g00024 872 MobiDBLite consensus disorder prediction 143 430 - -
Gabi2556g00024 872 Gene3D Formin, FH2 domain 427 835 IPR042201 -
Gabi2556g00024 872 MobiDBLite consensus disorder prediction 387 421 - -
Gabi2556g00024 872 MobiDBLite consensus disorder prediction 249 269 - -
Gabi2556g00024 872 MobiDBLite consensus disorder prediction 72 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2556g00024 Gabi-Chr2556 178659 183183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2556g00024 382 862 FH2 protein (formin) Gene Family AT5G67470 69.512 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2556g00024 - - gmx:100803578 1150.96