Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi2556g00020 | ATGGAGAGTTATTTAAATGAGAATTTTGGTGGGGTGAAGTCCAAGAACTCTCCAGAAGAGGCTCTTGGAAAATGGAGGAAATTATGTGGGGTTGTAAAGAACCCCAAAAGACGTTTTCGTTTCACTGCCAACCTCTCCAAGAGGTACGAAGCAGCTGCTATGCGTCGTACCAATCAGGAGAAGCTGAGGGTTGCTGTTTTGGTTTCCAAAGCTGCATTTCAATTTATTCAAGGCAAGTTTCTCAAGAACTCAAGCGATTACGTTGTACCTGAGGAAGTTAAAGCCGCAGGTTTCCAAGTATGTGCTGATGAATTAGGGTCTATTGTTGAATCCCACGATGTAAAGAAGCTCAAGTTTCACGGTGGAGTCAGTGGTATAGCAGAAAAGCTTTCAACATCAACCACTAAGGGGCTTAGTGGTGATTCTAATTCGCGGCTTGTGAGACAAGAGATTTATGGAGTCAATAAATTCACTGAAAGTGAAGTTCGGAGTTTCTGGGTTTTTGTTTTTGAAGCCCTTCAAGACATGACTCTCATGATCCTTGGAGTGTGTGCTTTTGTGTCTCTGATAGTTGGCGTAGCAACAGAAGGATGGCCCAAAGGTGCTCATGATGGTCTTGGAATTGTTGCAAGTATCTTCCTGGTTGTCTTTGTGACAGCAACAAGTGATTATCGCCAATCATTACAATTCAAGGATTTAGATAAGGAGAAGAAAAAGATTTCCATTCAGGTTACAAGAAATGGTTATAGGCAGAAAATGTCAATATATAATTTACTTGCTGGTGATATTGTGCATCTTGCCATTGGTGACCAAGTCCCTGCAGATGGTTTATTTGTTTCAGGATTTTCTGTGTTGATTGATGAGTCAAGTTTAACTGGTGAGAGTGAGCCAGTGATGGTGACTTCCCAAAATCCATTTCTTCTTTCTGGAACCAAGGTTCAAGATGGATCATGTACTATGTTGGTTACCACTGTTGGGATGAGGACTCAATGGGGTAAGTTGATGGCAACTCTAAGTGAAGGTGGAGATGATGAAACACCATTGCAAGTCAAACTGAATGGAGTGGCAACTATTATTGGGAAGATAGGACTATTCTTTGCTGTGGTTACTTTTGCAGTTTTGGTTAAAGGACTCATGAGCCGCAAACTCCAACAAGGAAGATTCTTTAGGTGGTCTGCGGATGATGCAATGGAGCTGTTGGAATTTTTTGCTATTGCAGTTACAATTGTTGTTGTTGCAGTTCCTGAGGGACTACCATTGGCTGTGACATTGAGCCTTGCATTTGCAATGAAGAAGATGATGAATGACAAAGCACTTGTTAGGAATTTGGCAGCTTGTGAGACAATGGGATCAGCTACAACTATATGTAGTGACAAGACTGGGACACTAACAACAAACCGCATGACTGTAGTGAAAACATGCATTTGTATGAATAGTAAGGAAGTCAACAGCAATGATTCTAGTTTGTGTTCTGAACTCCCAGATTCTGCTGTGAAACTTTTGCTGCAGTCAATATTTAACAACACTGGAGGAGAGGTTGTGGTTAACAAAAAGGGTAAACGTGAGATCTTGGGGACACCAACAGAGTCAGCAATATTGCAATTTGGGTTATCACTGGGTGGGGATTTTCAGGCAGAGAAAGAAGCATGTAAACTTGTTAAAGTTGAGCCATTCAACTCAGAGAAGAAAAGAATGGGTGTAGTTTTGGAGCTACCCGAAGGAGGTTTACGAGCACATTGTAAAGGTGCTTCTGAAATAATTCTGGCTGCTTGTGACAAGGTGATAAACTCAAATGGTGATGTTGTTTCCCTTGATGAAGAATCAAGTAATTATCTTACGAGTACAATCAACCAGTTTGCTAGTGAGGCACTTAGAACTCTTTGCCTTGCTTATATTGAATTAGGTCCAGACTTTAGAGAGAAGACTCAGGAGGAATTGTTTGAACTGATTCCCAAAATTCAGGTTATGGCTCGATCCTCACCTTTAGACAAACATACATTGGTAAAACACCTGCGTACCACGTTCGGGGAAGTTGTAGCCGTAACTGGTGATGGAACAAATGATGCTCCAGCCCTTCATGAAGCTGACATTGGACTTGCAATGGGAATTGCAGGAACTGAGGTTGCTAAAGAAAGTGCAGATGTCATTATTCTAGACGATAATTTCTCCACAATAGTGACAGTGGCCAAATGGGGACGTTCAGTTTACATAAATATTCAGAAATTTGTACAGTTTCAGCTAACTGTAAATGTGGTGGCATTACTAGTGAACTTCTCATCAGCCTGCTTGACAGGCAGTGCACCCCTCACGGCTGTTCAACTTTTGTGGGTGAATATGATAATGGACACGCTGGGAGCACTTGCACTTGCAACTGAACCTCCAACTGATGATCTAATGAAGCGTTCACCAGTTGGAAGGAAGGGGGATTTTATCAACAATGTCATGTGGAGGAATATCTTAGGACAATCATTGTATCAGTTTGTGGTTATATGGTTTCTTCAGACAATGGGAAAATGGATATTTTTTCTAAGGGGGCCAAACGCTGATTTAGTCTTGAACACACTTATTTTCAACTCATTTGTCTTCTGTCAGGTTTTTAATGAGATAAACTCTCGTGAGATGGAGGAACTAGATGTTTTTAAGGGCATATGGGACAATCATGTGTTCGTGGTTGTCATTGGTTGCACTGTTTTCTTTCAAATCATAATAGTTGAGTACTTGGGCACCTTTGCAAACACAACACCTCTCTCTCTGGTACAGTGGATATTTTGCTTATCGGTTGGATATATGGGCATGCCAATTGCCACTCACTTAAAACAGATCCCTGTCTGA | 2832 | 0.4131 | MESYLNENFGGVKSKNSPEEALGKWRKLCGVVKNPKRRFRFTANLSKRYEAAAMRRTNQEKLRVAVLVSKAAFQFIQGKFLKNSSDYVVPEEVKAAGFQVCADELGSIVESHDVKKLKFHGGVSGIAEKLSTSTTKGLSGDSNSRLVRQEIYGVNKFTESEVRSFWVFVFEALQDMTLMILGVCAFVSLIVGVATEGWPKGAHDGLGIVASIFLVVFVTATSDYRQSLQFKDLDKEKKKISIQVTRNGYRQKMSIYNLLAGDIVHLAIGDQVPADGLFVSGFSVLIDESSLTGESEPVMVTSQNPFLLSGTKVQDGSCTMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVLVKGLMSRKLQQGRFFRWSADDAMELLEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNRMTVVKTCICMNSKEVNSNDSSLCSELPDSAVKLLLQSIFNNTGGEVVVNKKGKREILGTPTESAILQFGLSLGGDFQAEKEACKLVKVEPFNSEKKRMGVVLELPEGGLRAHCKGASEIILAACDKVINSNGDVVSLDEESSNYLTSTINQFASEALRTLCLAYIELGPDFREKTQEELFELIPKIQVMARSSPLDKHTLVKHLRTTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALLVNFSSACLTGSAPLTAVQLLWVNMIMDTLGALALATEPPTDDLMKRSPVGRKGDFINNVMWRNILGQSLYQFVVIWFLQTMGKWIFFLRGPNADLVLNTLIFNSFVFCQVFNEINSREMEELDVFKGIWDNHVFVVVIGCTVFFQIIIVEYLGTFANTTPLSLVQWIFCLSVGYMGMPIATHLKQIPV | 943 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi2556g00020 | 943 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 120 | 942 | IPR023298 | - | |
Gabi2556g00020 | 943 | Gene3D | - | 171 | 508 | - | - | |
Gabi2556g00020 | 943 | PRINTS | Sodium/potassium-transporting ATPase signature | 449 | 470 | - | - | |
Gabi2556g00020 | 943 | PRINTS | Sodium/potassium-transporting ATPase signature | 206 | 226 | - | - | |
Gabi2556g00020 | 943 | PRINTS | Sodium/potassium-transporting ATPase signature | 578 | 596 | - | - | |
Gabi2556g00020 | 943 | NCBIfam | HAD-IC family P-type ATPase | 396 | 490 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Gabi2556g00020 | 943 | NCBIfam | HAD-IC family P-type ATPase | 653 | 765 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Gabi2556g00020 | 943 | Pfam | Cation transporter/ATPase, N-terminus | 120 | 188 | IPR004014 | - | |
Gabi2556g00020 | 943 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 110 | 635 | IPR006408 | GO:0005388|GO:0005524|GO:0016020|GO:0070588 | |
Gabi2556g00020 | 943 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 462 | 638 | IPR023299 | GO:0000166 | |
Gabi2556g00020 | 943 | SUPERFAMILY | HAD-like | 631 | 730 | IPR036412 | - | |
Gabi2556g00020 | 943 | Pfam | Cation transporting ATPase, C-terminus | 767 | 939 | IPR006068 | - | |
Gabi2556g00020 | 943 | SUPERFAMILY | Calcium ATPase, transduction domain A | 242 | 336 | IPR008250 | - | |
Gabi2556g00020 | 943 | FunFam | Calcium-transporting ATPase | 699 | 943 | - | - | |
Gabi2556g00020 | 943 | FunFam | Calcium-transporting ATPase | 219 | 339 | - | - | |
Gabi2556g00020 | 943 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 5 | 50 | IPR024750 | GO:0005516 | |
Gabi2556g00020 | 943 | Gene3D | - | 510 | 651 | IPR023299 | GO:0000166 | |
Gabi2556g00020 | 943 | FunFam | Calcium-transporting ATPase | 17 | 77 | - | - | |
Gabi2556g00020 | 943 | Gene3D | - | 213 | 314 | - | - | |
Gabi2556g00020 | 943 | PANTHER | CATION TRANSPORTING ATPASE | 82 | 632 | - | - | |
Gabi2556g00020 | 943 | Pfam | E1-E2 ATPase | 240 | 434 | - | - | |
Gabi2556g00020 | 943 | Pfam | Cation transport ATPase (P-type) | 516 | 594 | - | - | |
Gabi2556g00020 | 943 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 458 | 464 | IPR018303 | - | |
Gabi2556g00020 | 943 | Gene3D | - | 17 | 77 | - | - | |
Gabi2556g00020 | 943 | PRINTS | P-type cation-transporting ATPase superfamily signature | 456 | 470 | - | - | |
Gabi2556g00020 | 943 | PRINTS | P-type cation-transporting ATPase superfamily signature | 287 | 301 | - | - | |
Gabi2556g00020 | 943 | PRINTS | P-type cation-transporting ATPase superfamily signature | 706 | 718 | - | - | |
Gabi2556g00020 | 943 | PRINTS | P-type cation-transporting ATPase superfamily signature | 682 | 701 | - | - | |
Gabi2556g00020 | 943 | Gene3D | - | 694 | 942 | - | - | |
Gabi2556g00020 | 943 | FunFam | Calcium-transporting ATPase | 466 | 652 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi2556g00020 | Gabi-Chr2556 | 171602 | 177575 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi2556g00020 | 635 | 943 | Primary Pumps ATPases | AT4G37640 | 84.142 | 3.91e-180 | 547 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi2556g00020 | K01537 | - | gmx:100776926 | 1108.2 |