Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2556g00002 ATGGTGACAATAGTCGTTGGCATGATGTTGGTGTCAGTGTTGCCAGTGAGAAGAGGTGTTGTCAAAGGAATTGATTATGGGTCAACTGGGGAAGTTAAGAAAGTAGATGTTTCTCGCATGCGTGAGAGGCTTGATGGCGGTTGTATAGTTATTTTAAGCAACTTGGGCTATTCTAGCTCTGGAGAAGTATTAAATTGCAATACCTATGAAGTTGCAACAGCTTGTGCCTTGGCTATAGGAGCAGACAAGCTTATATGCATTATAGATGGTCCGATACTTGACGAAAGTGGACGCCTTATTCGTTTCTTGCCTCTTCAAGAAGCAGACATGCTAATTCGTAAACGGGTTGAGGAAAGTGAAACAGCTGCTAACTATGTGAAAGCTGTTGATGAAGAAGGTTTCAATTCTCTTGGGTATAAAATTTTTAATGGGGCAGTCCATTCTCCACAGAATGGAAAACCATTTTCAGAATGGCATAATGCAACCTTTCATAATGGCATTGGTTTTGACAATGGAAATGGGCTATGGTCTGGTGAGCAAGGTTTTGCCATAGGAGGTCAGGAATGGCTAAGTCGAATGAATGGTTACCTGTCAGAACTGGCGGCTGCAGCCTTCGTTTGCAGAGGTGGTGTTCAAAGAGTTCACTTGTTGGATGGCACTATTAGTGGAGTTCTATTGTTGGAATTGTTTAAGAGAGATGGGATGGGAACAATGGTGGCTAGTGACCTTTATGAAGGCACCCGAATGGCTCAAGTAACAGATATTACTGGAATAAAACAAATTATCCAGCCTTTGGAGGAGTCTGGCATATTGGTTAAGCGGACTGATGAAGAGCTTCTTCAATCGTTGGGTTCCTTCATTGTTGTGGAAAGAGAAGGACAAATAATTGCTTGTGCTGCACTTTTTCCTTTCTTTGAGGAGAACTGTGCAGAGGTTGCTGCAATTGCAGTATCTCCTGATTGCCGAGGCCAAGGACAGGGAGACAAGTTGCTTGATTATATAGAGAAGAAGGCATCATCCGTTGGGTTCAATATGCTTTTCTTGCTTACTACTCGTACAGCAGATTGGTTTGTGAGGCGGGGTTTTTCAGAATGTTCAATTGATTCTATACCTGAGAAGAAAAGGAAAACGATTAATCTGTCCCGAAAATCCAAGTATTATATGAAGAAGCTTCTACCTAATAGGACTGGAATTACTGCTGGTAGGAAATTTACTTCCTGTTAG 1224 0.4199 MVTIVVGMMLVSVLPVRRGVVKGIDYGSTGEVKKVDVSRMRERLDGGCIVILSNLGYSSSGEVLNCNTYEVATACALAIGADKLICIIDGPILDESGRLIRFLPLQEADMLIRKRVEESETAANYVKAVDEEGFNSLGYKIFNGAVHSPQNGKPFSEWHNATFHNGIGFDNGNGLWSGEQGFAIGGQEWLSRMNGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQVTDITGIKQIIQPLEESGILVKRTDEELLQSLGSFIVVEREGQIIACAALFPFFEENCAEVAAIAVSPDCRGQGQGDKLLDYIEKKASSVGFNMLFLLTTRTADWFVRRGFSECSIDSIPEKKRKTINLSRKSKYYMKKLLPNRTGITAGRKFTSC 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2556g00002 407 SUPERFAMILY Carbamate kinase-like 16 114 IPR036393 -
Gabi2556g00002 407 Hamap Amino-acid acetyltransferase [argA]. 1 391 IPR010167 GO:0004042|GO:0005737|GO:0006526
Gabi2556g00002 407 Pfam Amino acid kinase family 7 113 IPR001048 -
Gabi2556g00002 407 CDD NAT_SF 286 348 - -
Gabi2556g00002 407 PANTHER AMINO-ACID ACETYLTRANSFERASE 17 399 IPR010167 GO:0004042|GO:0005737|GO:0006526
Gabi2556g00002 407 NCBIfam amino-acid N-acetyltransferase 200 391 IPR010167 GO:0004042|GO:0005737|GO:0006526
Gabi2556g00002 407 PIRSF ArgA 2 391 IPR010167 GO:0004042|GO:0005737|GO:0006526
Gabi2556g00002 407 Pfam Acetyltransferase (GNAT) family 284 350 IPR000182 GO:0016747
Gabi2556g00002 407 Gene3D - 6 242 IPR036393 -
Gabi2556g00002 407 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 245 393 IPR000182 GO:0016747
Gabi2556g00002 407 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 248 395 IPR016181 -
Gabi2556g00002 407 Gene3D - 244 391 - -
Gabi2556g00002 407 SUPERFAMILY Carbamate kinase-like 193 241 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2556g00002 Gabi-Chr2556 14698 32895 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gabi2556g00002 Acetyltransf_1 3.9e-11 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2556g00002 K14682 - gmx:100800925 693.73