Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2556g00001 ATGGGAGCGTGGTGGAAGACGAGAGCCACAGCTACATGGATGACAAGCAATTCGTGCGTTGGTTTCGTGAGACATGGCCTTACTTGTGGGCCCATCGTGGTGCCACCTTCGTTCTCATCATTTCCGGATATAGCTTTCCTTCATCACCTGGGAATCCGGTTTGTTCTTGTTCCGGGGACCCATGTGCAAATTGACAATCTTTTGCGTGAGAGAGGGAGCCAGCCTAAGTATGTTGGTCCATATAGGATAACGGATGATGAATCTCTAGCAGCTGCAATGGAAGCAGCTGGGAGAATAAGATTGATGATTGAAGCAAAGCTTTCTCCTGGACCCTCCATTTGCAATATTCGTCGACATGGTGACAATAGTCGTTGGCATGATGTTGGTGTCAGTGTTGCCAGTGGTAACTTTCTTGCAGCCAAGAGAAGAGGTGTTGTCAAAGGAATTGATTATGGGTCAACTGGGGAAGTTAAGAAAGTAGATGTTTCTCGCATGCGTGAGAGGCTTGATGGCGGTTGTATAGTTATTTTAAGCAACTTGGGCTATTCTAGCTCTGGAGAAGTATTAAATTGCAATACCTATGAAGTTGCAACAGCTTGTGCCTTGGCTATAGGAGCAGACAAGCTTATATGCATTATAGATGGTCCGATACTTGACGAAAGTGGACGCCTTATTCGTTTCTTGCCTCTTCAAGAAGCAGACATGCTAATTCGTAAACGGGTTGAGGAAAGTGAAACAGCTGCTAACTATGTGAAAGCTGTTGATGAAGAAGGTTTCAATTCTCTTGGGTATAAAATTTTTAATGGGGCAGTCCATTCTCCACAGAATGGAAAACCATTTTCAGAATGGCATAATGCAACCTTTCATAATGGCATTGGTTTTGACAATGGAAATGGGCTATGGTCTGGTGAGCAAGGTTTTGCCATAGGAGGTCAGGAATGGCTAAGTCGAATGAATGGTTACCTGTCAGAACTGGCGGCTGCAGCCTTCGTTTGCAGAGGTGGTGTTCAAAGAGTTCACTTGTTGGATGGCACTATTAGTGGAGTTCTATTGTTGGAATTGTTTAAGAGAGATGGGATGGGAACAATGGTGGCTAGTGACCTTTATGAAGGCACCCGAATGGCTCAAGTAACAGATATTACTGGAATAAAACAAATTATCCAGCCTTTGGAGGAGTCTGGCATATTGGTTAAGCGGACTGATGAAGAGCTTCTTCAATCGTTGGGTTCCTTCATTGTTGTGGAAAGAGAAGGACAAATAATTGCTTGTGCTGCACTTTTTCCTTTCTTTGAGGAGAACTGTGCAGAGGTTGCTGCAATTGCAGTATCTCCTGATTGCCGAGGCCAAGGACAGGGAGACAAGTTGCTTGATTATATAGAGAAGAAGGCATCATCCGTTGGGTTCAATATGCTTTTCTTGCTTACTACTCGTACAGCAGATTGGTTTGTGAGGCGGGGTTTTTCAGAATGTTCAATTGATTCTATACCTGAGAAGAAAAGGAAAACGATTAATCTGTCCCGAAAATCCAAGTATTATATGAAGAAGCTTCTACCTAATAGGACTGGAATTACTGCTGGTAGGAAATTTACTTCCTGTTAG 1599 0.4353 MGAWWKTRATATWMTSNSCVGFVRHGLTCGPIVVPPSFSSFPDIAFLHHLGIRFVLVPGTHVQIDNLLRERGSQPKYVGPYRITDDESLAAAMEAAGRIRLMIEAKLSPGPSICNIRRHGDNSRWHDVGVSVASGNFLAAKRRGVVKGIDYGSTGEVKKVDVSRMRERLDGGCIVILSNLGYSSSGEVLNCNTYEVATACALAIGADKLICIIDGPILDESGRLIRFLPLQEADMLIRKRVEESETAANYVKAVDEEGFNSLGYKIFNGAVHSPQNGKPFSEWHNATFHNGIGFDNGNGLWSGEQGFAIGGQEWLSRMNGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQVTDITGIKQIIQPLEESGILVKRTDEELLQSLGSFIVVEREGQIIACAALFPFFEENCAEVAAIAVSPDCRGQGQGDKLLDYIEKKASSVGFNMLFLLTTRTADWFVRRGFSECSIDSIPEKKRKTINLSRKSKYYMKKLLPNRTGITAGRKFTSC 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2556g00001 532 Hamap Amino-acid acetyltransferase [argA]. 1 516 IPR010167 GO:0004042|GO:0005737|GO:0006526
Gabi2556g00001 532 SUPERFAMILY Carbamate kinase-like 318 366 IPR036393 -
Gabi2556g00001 532 CDD NAT_SF 411 473 - -
Gabi2556g00001 532 PIRSF ArgA 29 516 IPR010167 GO:0004042|GO:0005737|GO:0006526
Gabi2556g00001 532 Gene3D - 370 516 - -
Gabi2556g00001 532 SUPERFAMILY Carbamate kinase-like 42 239 IPR036393 -
Gabi2556g00001 532 NCBIfam amino-acid N-acetyltransferase 325 516 IPR010167 GO:0004042|GO:0005737|GO:0006526
Gabi2556g00001 532 CDD AAK_NAGS-ABP 30 364 IPR033719 -
Gabi2556g00001 532 Pfam Amino acid kinase family 44 238 IPR001048 -
Gabi2556g00001 532 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 373 520 IPR016181 -
Gabi2556g00001 532 PANTHER AMINO-ACID ACETYLTRANSFERASE 41 524 IPR010167 GO:0004042|GO:0005737|GO:0006526
Gabi2556g00001 532 Gene3D - 31 369 IPR036393 -
Gabi2556g00001 532 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 370 518 IPR000182 GO:0016747
Gabi2556g00001 532 Pfam Acetyltransferase (GNAT) family 409 475 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2556g00001 Gabi-Chr2556 14079 32895 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gabi2556g00001 AA_kinase 4.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2556g00001 K14682 - gmx:100800925 879.396