Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2554g00047 ATGATCATTATAGCACGCCTTATGTTGCTGCTTGCGTTGTTTCTTTCATTCCTAACAAATACTGGCCAAATGGTATTTGCAAAAGGGAACGATAATGTTAGAGATGCTTGCAGTGTAACAAGGTATCAAGACCTTTGTATACACTCTCTAGCACATTTCTCTAACACTGCGGGAAGAAGCCCCAGCAAGTGGGCACGTGCTGGAGTGTCAGTGACAATTGGCGAGGTTAAGAATGTTCTAACATATGTGACAAAATTGAAGAGGAACGGAAGCATGAAAGGAAGAAACAGAGTTGCCCTTTCAGATTGTGTTGAGACTTTTGGCGATGCTCTTGATGAACTTCACAGATCACTGGGTGTTCTGAGGAGGCTGAGCAAAAGCACATTTAGTACCCAAATGGGGGACCTCAATACATGGATAAGTGCAGCACTCACTGACGAAGATACTTGCCTTGACGGGTTTCAAGGCAAAACTCAAAGGCAAATCAAATTGCTCCAAAATCGGGTTCAGAATGTGTCTTACATAACAAGTAACGCTCTAGCTCTCGTCAACAAACTTGCCACTACAGGTATTGGAAGCATCACTGATCCATAG 594 0.4327 MIIIARLMLLLALFLSFLTNTGQMVFAKGNDNVRDACSVTRYQDLCIHSLAHFSNTAGRSPSKWARAGVSVTIGEVKNVLTYVTKLKRNGSMKGRNRVALSDCVETFGDALDELHRSLGVLRRLSKSTFSTQMGDLNTWISAALTDEDTCLDGFQGKTQRQIKLLQNRVQNVSYITSNALALVNKLATTGIGSITDP 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2554g00047 197 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 188 IPR035513 -
Gabi2554g00047 197 SMART PMEI_2 28 182 IPR006501 GO:0004857
Gabi2554g00047 197 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 186 IPR035513 -
Gabi2554g00047 197 Pfam Plant invertase/pectin methylesterase inhibitor 32 182 IPR006501 GO:0004857
Gabi2554g00047 197 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 182 - -
Gabi2554g00047 197 NCBIfam pectinesterase inhibitor domain 7 186 IPR006501 GO:0004857
Gabi2554g00047 197 CDD PMEI-like_3 36 188 - -
Gabi2554g00047 197 FunFam Pectinesterase inhibitor 3 28 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2554g00047 Gabi-Chr2554 264202 265154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2554g00047 33 194 Carbohydrate Esterase AT3G14310 35.329 1.20e-22 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2554g00047 - - gmx:100791264 290.426