Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2554g00012 ATGGCGGCATTGTCCTTTTCGGTGGCTTCGGTTGTGGAGGATGTGCTACAACAGCATGGCACTCGTCACAAAGATCTTGATTTGGAATCTAGGAAAGCAGAAGAAGCTGCATCCAGAAGATATGAAGCAGCAGGGTGGCTGAGAAAAATGGTTGGAGTTGTTGCAGCTAAAGATTTGCCAGCAGAGCCCTCGGAGGAAGAGTTTAGGTTTGGTTTAAGAAGTGGGATTATCCTCTGCAATGTTATTAATAAGGTTCAACCTGGAGCTGTACCCAAGGTTGTGGAGAGTCCTGTTGATTCTGCACTGATCCCCGATGGGGCACCTTTATCGGCATATCAGTATTTTGAAAATGTGAGGAATTTCCTGGTGGCTGTTCAAGAAATTGGACTTCCTACCTTTGAGGCATCTGATCTGGAACAAGGAGGAAAATCATCCAGGATTGTGAACAGCGTCTTAGCCCTTAAATCCTATTGTGAATGGAAACAGACGGGGGCAAATGGTGTGTGGAAATTTGGCGGAACTCTCAAACCCACTATCTCTGCAAAATCTTTTGTGAGAAAAAACTCGGAGCCATTTACGAATTCTTTGTCAAGGACTTCTTCGATCAATGAAAAATCTCTGACTACTCTTAACTCTGATGTGGAGTATAATAAAATGTCTGGTTCCCATTCCTTGAGTATGCTTGTTCGGGCAATCCTATCAGATAAGAAGCCTGAAGAAGTTCCGATGTTGGTTGAATCTGTTTTGAATAAGGTTGTTGAGGAGTTTGAGCATCGTATTGCAAGCCAAAGTGAACAGACAAAAATAACCACAAGAGATTCTGTTTCTCAAAGCAACGGGTCTGCATCAAAGTTTGTTATGGCAGATAAAAAGGTGGAGAACAAGATTCATGCTCTAACAAAGAAAGAGGATTGCATTCATAAAACCCGTATTGCTGCTGAGGAATCACAAAGCCAACTTCTGAAGCAGCAAATGCTCTCTGATCAGCAGCAAAGGGATATTCAAGACCTAAAACATACTCTTCACACCACAAAAGCTGGTATGCAGTTCATGCAAATGAAATTTCATGAGGAGTTCTACAATCTTGGCATGCACATTCATGGCTTAGCTCACGCTGCTTCTGGATATCATAGAGTTCTTGAAGAAAATCGCAAACTATACAATCAAGTCCAGGATCTTAAGGGAAGTATTAGGGTGTACTGTCGAGTAAGACCCTTCTTTCCTGGACGACCAAACCATTTGAGCACAGTAGAAAATATTGAAGATGGAACTATCACAGTTAACATTCCTTCAAAGAATGGGAAGGGACGCAGATCCTTCAACTTCAACAAAGTCTTTGGACCATCTGCAACCCAAGCGGAAGTCTTCTTTGATATGCAGCCACTTCTTAGATCTGTTCTTGATGGTTATAATGTTTGCATATTTGCATATGGACAAACAGGATCAGGAAAAACTTACACTATGACTGGACCAAAAGAGATCACAGAGAAAAGCCAAGGCGTAAATTATAGGGCTCTCAGTGATTTGTTTGATTTAGCAGATCAAAGAAAGGACACTTTCCACTATGACGTTTCTGTTCAAATGATTGAGATTTACAATGAGCAAGTCAGGGATCTACTGGTCACTGATGGAACAAACAGAAGATTAGAAATTCGTAGTAGTTCTCACAAAGGGCTCAGCGTACCAGATGCAAGCCTTGTCACTGTTTCATCAACTACTGATGTGATTGAACTAATGAACCTTGGGCAAAGGAACCGTGCAGTTGGAGCAACAGCCCTTAATGACCGCAGCAGCCGATCTCATAGTTGCTTGACTGTTCATGTTCAAGGAAGAGATTTGACATCTGGAACTATCCTTCGTGGATGCTTGCATTTGGTTGACTTGGCAGGAAGTGAGAGGGTAGATAAATCTGAGGCCACAGGAGATAGGCTAAAAGAGGCACAGCATATTAACAAATCTCTTTCAGCTTTGGGCGATGTCATCGCTTCCCTTGCTCAGAAAAACTCACACGTTCCTTACAGAAATAGTAAACTCACACAATTACTCCAAGATTCACTTGGAGGACAGGCTAAAACGCTAATGTTTGTTCACATAAGTCCAGAGATTGATGCTATTGGAGAAACATTTAGTACCTTAAAATTTGCAGAAAGAGTTGCTACAGTTGAACTTGGCGCTGCTCGAGTAAACAAGGATGGTGCAGATGTTAAAGAGCTCAAAGAACAGATCGCCAGCCTTAAGGCAGCACTTGCAAGAAAGGAAGGGGAATCAGAATATTCTTTATCCGGCCGCTCTGAAAAATACAGGAAAAAGGCTGGTGAGGTATCACCTTATCATATAAACCATAATACCCCATTGAGGCACAAAACTCAAAGCTTTGATTTTGACGAGATATCAGCAAATTCACCACCCTGGACCCCAGTGAACAGTCTTGGACAAAACCAAGGGGAGGATGATAAAGAAACTGGTTCTGGAGAGTGGGTTGATAAGGTCATGGTAAACAAGCTAGATGTAAACAAAACTGAGAACCTCTTGGGATGTTGGCAAGCAGGCAATGGGAACTTATCAGAGGCCTTTTATCAGAAATATCTCCAAGATTCTTCCAAAGTCTACACAGAACAATCATATAACATGTTCATGGGAGGCAACCAGTTTAATATTGCAGGTTCAGATGACATGGATGAGCTTGATGCTGCAACCAGTGATTCCTCAGAACCTGACTTGCTTTGGCAATTTAATCATTCCAAACTAGCCAGCCTTACCAATGGAGTTGGATCCAGGACTATGGTATCTGTCTCAAAGACAGCAAAAAGCCCAGAATTGAGCAAGAATGCTGCAGTTCATTCTTCTCTTGGTCCTTCACCTTTATTGAAACGATCAAATAGTGTCTCACATCGAACTGGAAGGCATCCAGCTACAGTTGACGTGAAACGTAAAACTGGGAGTAGAAAGTAA 2952 0.4214 MAALSFSVASVVEDVLQQHGTRHKDLDLESRKAEEAASRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRFGLRSGIILCNVINKVQPGAVPKVVESPVDSALIPDGAPLSAYQYFENVRNFLVAVQEIGLPTFEASDLEQGGKSSRIVNSVLALKSYCEWKQTGANGVWKFGGTLKPTISAKSFVRKNSEPFTNSLSRTSSINEKSLTTLNSDVEYNKMSGSHSLSMLVRAILSDKKPEEVPMLVESVLNKVVEEFEHRIASQSEQTKITTRDSVSQSNGSASKFVMADKKVENKIHALTKKEDCIHKTRIAAEESQSQLLKQQMLSDQQQRDIQDLKHTLHTTKAGMQFMQMKFHEEFYNLGMHIHGLAHAASGYHRVLEENRKLYNQVQDLKGSIRVYCRVRPFFPGRPNHLSTVENIEDGTITVNIPSKNGKGRRSFNFNKVFGPSATQAEVFFDMQPLLRSVLDGYNVCIFAYGQTGSGKTYTMTGPKEITEKSQGVNYRALSDLFDLADQRKDTFHYDVSVQMIEIYNEQVRDLLVTDGTNRRLEIRSSSHKGLSVPDASLVTVSSTTDVIELMNLGQRNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGTILRGCLHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNSHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEIDAIGETFSTLKFAERVATVELGAARVNKDGADVKELKEQIASLKAALARKEGESEYSLSGRSEKYRKKAGEVSPYHINHNTPLRHKTQSFDFDEISANSPPWTPVNSLGQNQGEDDKETGSGEWVDKVMVNKLDVNKTENLLGCWQAGNGNLSEAFYQKYLQDSSKVYTEQSYNMFMGGNQFNIAGSDDMDELDAATSDSSEPDLLWQFNHSKLASLTNGVGSRTMVSVSKTAKSPELSKNAAVHSSLGPSPLLKRSNSVSHRTGRHPATVDVKRKTGSRK 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2554g00012 983 Coils Coil 728 755 - -
Gabi2554g00012 983 PANTHER KINESIN-LIKE PROTEIN KLP-3 44 865 IPR027640 GO:0003777|GO:0007018
Gabi2554g00012 983 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 396 755 IPR027417 -
Gabi2554g00012 983 SMART kinesin_4 394 729 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi2554g00012 983 MobiDBLite consensus disorder prediction 934 983 - -
Gabi2554g00012 983 MobiDBLite consensus disorder prediction 969 983 - -
Gabi2554g00012 983 Pfam Calponin homology (CH) domain 38 159 IPR001715 GO:0005515
Gabi2554g00012 983 Gene3D Kinesin motor domain 391 761 IPR036961 -
Gabi2554g00012 983 ProSiteProfiles Kinesin motor domain profile. 396 721 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi2554g00012 983 ProSiteProfiles Calponin homology (CH) domain profile. 37 159 IPR001715 GO:0005515
Gabi2554g00012 983 SMART ch_5 39 157 IPR001715 GO:0005515
Gabi2554g00012 983 MobiDBLite consensus disorder prediction 803 822 - -
Gabi2554g00012 983 MobiDBLite consensus disorder prediction 803 817 - -
Gabi2554g00012 983 CDD CH_AtKIN14-like 39 156 - -
Gabi2554g00012 983 MobiDBLite consensus disorder prediction 934 967 - -
Gabi2554g00012 983 FunFam Kinesin-like protein KIN-14I isoform A 391 763 - -
Gabi2554g00012 983 SUPERFAMILY Calponin-homology domain, CH-domain 35 169 IPR036872 -
Gabi2554g00012 983 CDD KISc_C_terminal 394 723 - -
Gabi2554g00012 983 Gene3D - 23 183 IPR036872 -
Gabi2554g00012 983 PRINTS Kinesin heavy chain signature 671 692 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi2554g00012 983 PRINTS Kinesin heavy chain signature 469 490 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi2554g00012 983 PRINTS Kinesin heavy chain signature 591 608 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi2554g00012 983 PRINTS Kinesin heavy chain signature 622 640 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi2554g00012 983 FunFam Kinesin-like protein KIN-14I isoform A 24 176 - -
Gabi2554g00012 983 Pfam Kinesin motor domain 414 720 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2554g00012 Gabi-Chr2554 63448 69480 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2554g00012 384 721 Calmodulin-binding Proteins AT5G65930 43.023 1.49e-77 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2554g00012 K10406 - gmx:100795476 1630.15