Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2552g00067 ATGGACGGTCACGGTGGGCCTGGGTCCAACAGAGCCGAAGCTGAACGGTGGCTTTACACAGCCAACAAGCTCCTCACCGCACGTGACCTGCACGGGGCCCGCTCATTCGCCATCCGGGCCCGAGAATCCGACCCGAGATTCGACGCAACTGAGCTCCTCCTCGCCGTCATCGACACACTCCTCGCCGGCGAGTCTCGGATCAACGACCACCTCGACTTGTACTCCATCCTCCAAGTCCTCCGGTACACTCAGAACATCGAGCACATCGCCGCCCAGTACCGCCGCCTGGTCATCCTCCTTGACCCTCACCGTAACCCCTTCGCCTTCTCCAGTCACGCCTTCACGCTCGTCCATGACGCGTGGACCGTACTCTCCAACCCAACAAAGAAGGCACTATACGACAACCAACTCAGATTGCTCACCGAACCCCCTCCTCCTCCTCCACCTCCTCCACCTCCCCCTCCCCCTCCCCCTGCTCCGCCGATTCAGAACCCTACGTCCAATATCACCGAAGGGAGAAGTTTCTGGACGGCGTGTCCGTACTGTTACGTCATGTACGAGTACCCGAAGGTGTACGAGGAGTGTACCCTCCGCTGCCAGAGTTGCCGGAGGGGGTTCCATGCGGTGGTGGTGAGGTCACCGCCTTCGTCTTCTTTGACCGGGGATGATAAAGATGGTTCCTTTTGCAGTTGGGGATTTTTCCCTGTAGGGTTTTCTGGCAATTTCAAGGATATCGGTGGGTCTTCTTCCAAGTGGAACCCTTTTTCTCCTTTGTTTCCTTGCTCTTTGAGAGGAGATTCCAATAAGCCTCGTAAAAAGGATTGGGTTTTTTATGACGATGATGCTTCTGCGGAGTTCGTGGATCTTTCCGACACGACGGAGGAGGATTCCGATGACTGGGACTGGCGGCGCGGGAAGAGGAAGGAGAGGAAGGAGAGGAAGAGGGGAAGGAGAAAAGGCTCTGCTGGTGCTGGTGTTAGTGGTAAAAGGACACCAATTGAGAGACCTAGGAGGGGGATTCATAATAGTGATGGGCATGCTAATGTGGATAATGGTGAGGCTGTTGATGGTGCCTCTGCAGGGTCAAATGCTGCAAGGCCGGAATCTAGCAAGAAAGCAGTATTGGTTAGTTCCAGGAGGAGGGGTGCAGGAAACTTGGGCAAGTTGGATTTGAATGTGGAATTTAGCAATGAGGTGGAAGAGCCTGCCCCTGAAGTGAATGAAGGGAATGTGAATGGGAATGTTACTGGAAATGGGAATGCTGAGGATAATATAGAAGGGATTGGGTTTTTTGAGGGGCTTGATGAATTCCTGAGTAGTTTACCCATTCTCAATGTTGTTGCGGATGAAAAGGTTAAGGGTCAATAG 1368 0.5373 MDGHGGPGSNRAEAERWLYTANKLLTARDLHGARSFAIRARESDPRFDATELLLAVIDTLLAGESRINDHLDLYSILQVLRYTQNIEHIAAQYRRLVILLDPHRNPFAFSSHAFTLVHDAWTVLSNPTKKALYDNQLRLLTEPPPPPPPPPPPPPPPPAPPIQNPTSNITEGRSFWTACPYCYVMYEYPKVYEECTLRCQSCRRGFHAVVVRSPPSSSLTGDDKDGSFCSWGFFPVGFSGNFKDIGGSSSKWNPFSPLFPCSLRGDSNKPRKKDWVFYDDDASAEFVDLSDTTEEDSDDWDWRRGKRKERKERKRGRRKGSAGAGVSGKRTPIERPRRGIHNSDGHANVDNGEAVDGASAGSNAARPESSKKAVLVSSRRRGAGNLGKLDLNVEFSNEVEEPAPEVNEGNVNGNVTGNGNAEDNIEGIGFFEGLDEFLSSLPILNVVADEKVKGQ 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2552g00067 455 Gene3D DnaJ domain 67 142 IPR036869 -
Gabi2552g00067 455 SUPERFAMILY Chaperone J-domain 66 138 IPR036869 -
Gabi2552g00067 455 CDD DnaJ 72 126 IPR001623 -
Gabi2552g00067 455 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 6 335 - -
Gabi2552g00067 455 MobiDBLite consensus disorder prediction 294 376 - -
Gabi2552g00067 455 Pfam DnaJ domain 72 134 IPR001623 -
Gabi2552g00067 455 ProSiteProfiles dnaJ domain profile. 72 137 IPR001623 -
Gabi2552g00067 455 SMART dnaj_3 71 129 IPR001623 -
Gabi2552g00067 455 MobiDBLite consensus disorder prediction 140 164 - -
Gabi2552g00067 455 MobiDBLite consensus disorder prediction 138 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2552g00067 Gabi-Chr2552 337423 340411 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2552g00067 13 454 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 42.949 3.09e-106 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2552g00067 - - gmx:100818960 562.762