Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2552g00060 ATGGGAGTGGAGAAGCAACTGGTCAGGCCTGGAACCGGTCCCAAGCCAGTTCCCGGTCAGAACGTCACTGTTCACTGCACTGGTTACGGGAAAAACGGTGACCTTTCTCAGAAGTTTTGGAGCACGAAGGATCCTGGCCAGAACCCTTTCACATTCAAAATCGGCCAAGGCTCTGTTATCAAAGGATGGGATGAAGGTGTGATTGGCATGCAAATTGGTGAAGTTGCTCGTCTCCGGTGCTCTCCTGATTATGCCTATGGTGCTGGTGGCTTTCCTGCTTGGGGAATACAGCCCAACTCTACCTTGGAATTTGAAATTGAAGTCTTAAGTGTGCAATAA 339 0.4956 MGVEKQLVRPGTGPKPVPGQNVTVHCTGYGKNGDLSQKFWSTKDPGQNPFTFKIGQGSVIKGWDEGVIGMQIGEVARLRCSPDYAYGAGGFPAWGIQPNSTLEFEIEVLSVQ 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2552g00060 112 FunFam Peptidylprolyl isomerase 1 112 - -
Gabi2552g00060 112 SUPERFAMILY FKBP-like 2 111 - -
Gabi2552g00060 112 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 14 109 IPR001179 GO:0003755
Gabi2552g00060 112 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 19 112 IPR001179 GO:0003755
Gabi2552g00060 112 MobiDBLite consensus disorder prediction 1 22 - -
Gabi2552g00060 112 Gene3D - 1 112 IPR046357 GO:0003755
Gabi2552g00060 112 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 2 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2552g00060 Gabi-Chr2552 305222 306673 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2552g00060 2 110 Calmodulin-binding Proteins AT5G48570 42.727 1.20e-17 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2552g00060 K01802 - gmx:100500283 228.794