Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2552g00039 ATGGAGAGCTTTGTACTTCAATCGCTCTCCACCTCAATCTCCTTCTCCTCTCGCTCTTCCATTCTCCATCATCGTCCTCGTCCCATCACCAGATCCAACTCGTCTCTTCCATTCAATCACCACACCCCATCTTTCAGATCATCCATTATTTCTCAACCTTTCTTCTTTCCTTCAAAAGCTTCCACCTTTAATCCTTTCTCAAAACCCCACAAGCCAATCCAAGCTTCTTCTTCTTCATCTCAACCTCCACCACCTTCACCTTTAAAAGCCCCACATATTCTTCAGGGTGCAAAGCCAATCCCTTTTCTCATATCCATAAGCATAGGCCTCATTGTTCAATTCCTTGTTCCAAAACCAGTGGAAATCACACCTCAGGCATGGCAATTGCTCTCAATTTTCCTCTCAACAATTGCGGGCCTTGTTCTGAGCCCGTTGCCCGTTGGAGCATGGGCTTTTTTAGGCCTGACAGTGTCTGTGGTCACAAAAACTCTCACCTTTTCAGCTGCTTTCAGTGCTTTCACCAACGAGGTGATTTGGTTGATAGTGATTTCGTTCTTCTTTGCTCGTGGATTTGTGAAGACTGGGTTAGGGGATAGGATTGCAACTTACTTTGTGAAATGGATGGGAAAGAGCACGTTGGGGTTGTCTTATGGGCTATCATTCAGTGAGGTGCTTATTGCACCGGCAATGCCGAGCACCACCGCCAGAGCCGGTGGTGTGTTCTTGCCAATTATAAATTCACTATCACTCTCTGCAGGGAGTGAACCGGGTAAACCAACGGCTAAGAGGTTGGGAGCTTTTCTCGTTCAGAACCAATTTCAGTCTGCTGGTAACTCTAGTGCTCTTTTCCTAACTGCTGCAGCTCAAAATCTGCTGTGTTTGAAATTAGCAGAGGAGCTTGGAGTGGTAGTTTCAAACCCTTGGGTTACTTGGTTTAAGGCAGCTAGTTTACCTGCACTCGTTTGTCTTCTGGTTACACCATTGATTTTATACAAGCTCTATCCCCCAGAAATTAAAGATACACCAGATGCACCTGCCCTGGCTGCAAAGAAACTGGAAAGTATGGGCCCTGTCACTCAAAATGAATGGGTTATGGTTGTTACAATGCTTCTTGCAGTCTCTTTGTGGATCTTTGGAGAGACTCTTGGCATAGCAAGCACGGTAGCTGCGATGATTGGGTTATCAATACTCCTCATATCAGGAGTCCTTGATTGGAATGACTGCTTGAAAGAAAAATCGGCGTGGGATACCTTGGCTTGGTTTGCCGTTCTAGTAGGTATGGCAAGCCAGTTGACAAACCTTGGTATCGTGACCTGGATGTCGGATTGTGTGGCACACAATCTTCAGTCATTCTCATTGAGCTGGCCAGTTTCACTAGTTGTTCTTCAGGCAGCTTATTTCATCATCCACTACCTTTTTGCAAGTCAGACTGGACATGTGGGGGCTTTATACTCTGCATTTCTTGCTATGCATAGGGCAGCTGGTGTTCCTAGTGTTCTGGCAGCTCTTGCTTTAGGTTATAACACAAATCTTTTTGGTGCAATAACACACTATAGTAGTGGTCAGGCTGCTGTATACTATGGAGCTGGTTATGTAGACCTTCCTGATATATTCAAAATGGGGTTCATCATGGCCGTTATTAATGCAACCATCTGGGGAGGTGTTGGCTCTTTCTGGTGGAAATTTTTGGGCTTGTATTGA 1701 0.4533 MESFVLQSLSTSISFSSRSSILHHRPRPITRSNSSLPFNHHTPSFRSSIISQPFFFPSKASTFNPFSKPHKPIQASSSSSQPPPPSPLKAPHILQGAKPIPFLISISIGLIVQFLVPKPVEITPQAWQLLSIFLSTIAGLVLSPLPVGAWAFLGLTVSVVTKTLTFSAAFSAFTNEVIWLIVISFFFARGFVKTGLGDRIATYFVKWMGKSTLGLSYGLSFSEVLIAPAMPSTTARAGGVFLPIINSLSLSAGSEPGKPTAKRLGAFLVQNQFQSAGNSSALFLTAAAQNLLCLKLAEELGVVVSNPWVTWFKAASLPALVCLLVTPLILYKLYPPEIKDTPDAPALAAKKLESMGPVTQNEWVMVVTMLLAVSLWIFGETLGIASTVAAMIGLSILLISGVLDWNDCLKEKSAWDTLAWFAVLVGMASQLTNLGIVTWMSDCVAHNLQSFSLSWPVSLVVLQAAYFIIHYLFASQTGHVGALYSAFLAMHRAAGVPSVLAALALGYNTNLFGAITHYSSGQAAVYYGAGYVDLPDIFKMGFIMAVINATIWGGVGSFWWKFLGLY 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2552g00039 566 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 66 566 IPR030676 -
Gabi2552g00039 566 NCBIfam DASS family sodium-coupled anion symporter 118 560 IPR001898 GO:0016020|GO:0022857|GO:0055085
Gabi2552g00039 566 MobiDBLite consensus disorder prediction 68 90 - -
Gabi2552g00039 566 Pfam Sodium:sulfate symporter transmembrane region 103 565 IPR001898 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2552g00039 Gabi-Chr2552 206782 211916 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2552g00039 1 566 Antiporters AT5G64290 73.158 0.0 800
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2552g00039 - - gmx:100776794 921.768