Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi2552g00010 | ATGCTTGAACCGGATATGATGCACATAGTTTTTGTTCACTACTTGGAAGTTAAGGGTAACAAGACAAATATTGGAGGAGTTACCGATAGTGATGAGGTCACATCAGATTCCCAAAAGGTTACCTCTCCATCGTATGGCTTTCCCTCAAATTATAGCAGTGTACCTTCACCGAGTACCGATTCCATGAGCCCAACTAGCAGTTTGACATCTTTACGTGAAGATGCTGATTCTGAGGATATTCACCAAACAAGTTCTGGATTACGCCCATTACTTGAGTCGCAACAAATGGGGAATGGTCGTCCTCTGGCGGAAAAGGTTGATTCTGGTCCAAACAGTTCATATCTTATGCATCCCTTTTCAGGTAATCATGGACATTCATCAATTTCTGGAACGGATTATATCCCACCTGTTCACAGGGATAAATTTAGAGGAAATGATGCTACTTATATTGATCGCCAGAAAGCACATGGCATGACATCCTGGGACACTGTCTTGGAGCAATGCTCTGCAGAATTGCATAGCGATCCTTCTGTTGTATCATTTCCTTCCATGCCATCTAGTTCAATGAGAAATATCCTTGAACAAGAGCATACCATTTTGGGTGGTCTTTTAGAGAGCAAAAGTGGTCTCACTGAGGAAGCAGGGAGCTCTCAGTCTCTCCAATCAAATTGGCAGATTCCTTTTGAAGACAATTCAGGACATATGCTGACCTTAACCCAATCATTGGGTTTGGAATTTGGATCTGATTATGTCCCTAGTTTACTGGGGAATGAAACTCATAATGCCAGTTCTGAAATTGCTCCTGTCCTATTTAGTTTTTCTGGTGAGCCAAAAGAGCAGCTTGTGCAGCAAAACTATCCAGAACAGCATGCTGATGGACATTCTCAGGATGCACTATCTGCAAATAAAGTTCCTGGTGAAGAAAGTATCAGCTATGCCTTAACTATGAAGCGCACATTATTGGATAGAGATGGTAGCTTGAAGAAGGTTGATAGCTTCTCTCGGTGGATTACTAAAGAACTCGGAGATGTGGATGATTTGAATATGCAGTCCTCATCTGGTATTTCGTGGAGTACAGATGAATGTGGACATGTGATAGATGATACCTCATTGAGCCCATCTCTCTCTCAGGACCAACTGTTTAGCATTATTGATTTTTCGCCTAAATGGGCTTTTGCTGAATCGGAAATTGAGGTGTTAATTATTGGATCATTTTTGAAGAGTGAACCGGAGGTGACAACCTGTAACTGGTCCTGTATGTTTGGGGAATTGGAGGTTCCTGCTGAGGTTTTAGCTAATGGAATTCTGTGCTGTCAAGCTCCGCCTCATAAGGTTGGACGGGTCCCTTTCTATGTAACATGTTCCAATAGGTTAGCTTGTAGTGAAGTGCGGGAATTCGATTACAGAGAGGGCTTTTCTGGAAATGTAGATTTTGCAGATTTTTGTAACAGTTCAACTGAAATGCTGCTTCATTCTCGGCTGGAGGAGTTGCTTTCTTTAAAACCAGTGAACCCTTCAAATCAAAACTTTGAGGGTTATATGGAGAAAGGAAAGTTAATTTTTAAGCTTATTTCCCTGAGGGAGGAAGAAGAATATACGAGTAAGGAAGGAGAGCTTATAGAGATGGATATATCGCAACAAAAGGTGAAGGAGCATCTGTTTCACAGGCAGGTTAAGGAGAGGCTGTACTCATGGCTTCTTCACAAAATAACTGAGAGTGATAAAGGGCCAAATGTATTAGATAAGAATGGGCAAGGTGTCCTACATTTAGCAGCTGTTCTTGGTTATGATTGGGCCATAAAACCAATTTTATCCGCTGGAGTTAATATCAACTTCCGTGATGTGAATGGATGGACAGCTCTACATTGGGCGGCATCCTGTGGCAGGGAGCGGACAGTTGCTGTCCTTGTCTCCATGGGTGCAGATTCTGGAGCATTGACGGATCCATCTCCAGCATTTCCTTCAGGTAGAACACCTGCAGATCTTGCCTCTAACAATGGGCACAAAGGAATCTCTGGTTTTCTTGCTGAGTCTTCATTAACTAGCCACCTCGAATTCCTCACAATGGATGATCAACATAACGGTGGTAGGGAAGAAATTTCAGGAATAAAAGCAGTGCAGACAGTTTCAGAACGAACTGCAACACCTGTACTCTATGGTGATATGCCAGATGCCCTCTGCCTTAAGGATTCTCTTACTGCTGTCCGCAATGCTACACAAGCTGCTGATCGTATACATCAAGTATTCAGAATGCAGTCATTTCAGAGGAAGCAGTTAACTCAATATGAAGATGATGAGTTTGGATTGTCAGATCAGCTAGCTCTTTCCCTTCTAGCTTCTAAGGCGCATAAATCTGGACAAGGAGACGGTTTAGCCAATGCTGCAGCTGTACAAATACAGAAAAAGTTTCGTGGTTGGAAGAAGAGAAAAGAATTCTTGATCATTCGTCAAAGAATTGTTAAAATCCAGGCCCATGTAAGAGGTCACCAGGTAAGGAAGCAGTATAAAACGATAATCTGGTCTGTGGGAATCCTGGAGAAGGTAATATTACGCTGGAGACGTAAGGGTAGTGGTTTACGTGGATTTCGACCAGAAGCCCTTAATAAGGTCCCCAGTCAAGAAAATGATCCTCCGAAAGAGGATGACTATGATTATCTTAAGGAAGGACGGAAACAAAGTGAGGAAAAGATCCAAAAGGCCCTTTCAAGGGTGAAGTCCATGGTTCAGTATCCAGAGGCACGGGCTCAGTACCGGCGGCTGCTAAATGTTGTCGAGGACTTCCGTCAAACCAAGGCATGTAATATGGGTTTGATTAGTTCTGAAGAGACAGTTGATGGCGTGGAGGATTTGATTGATATTGATATGCTTTTAGATGATGATAATTTCATTCCTATAGCATTTGATTGA | 2907 | 0.4252 | MLEPDMMHIVFVHYLEVKGNKTNIGGVTDSDEVTSDSQKVTSPSYGFPSNYSSVPSPSTDSMSPTSSLTSLREDADSEDIHQTSSGLRPLLESQQMGNGRPLAEKVDSGPNSSYLMHPFSGNHGHSSISGTDYIPPVHRDKFRGNDATYIDRQKAHGMTSWDTVLEQCSAELHSDPSVVSFPSMPSSSMRNILEQEHTILGGLLESKSGLTEEAGSSQSLQSNWQIPFEDNSGHMLTLTQSLGLEFGSDYVPSLLGNETHNASSEIAPVLFSFSGEPKEQLVQQNYPEQHADGHSQDALSANKVPGEESISYALTMKRTLLDRDGSLKKVDSFSRWITKELGDVDDLNMQSSSGISWSTDECGHVIDDTSLSPSLSQDQLFSIIDFSPKWAFAESEIEVLIIGSFLKSEPEVTTCNWSCMFGELEVPAEVLANGILCCQAPPHKVGRVPFYVTCSNRLACSEVREFDYREGFSGNVDFADFCNSSTEMLLHSRLEELLSLKPVNPSNQNFEGYMEKGKLIFKLISLREEEEYTSKEGELIEMDISQQKVKEHLFHRQVKERLYSWLLHKITESDKGPNVLDKNGQGVLHLAAVLGYDWAIKPILSAGVNINFRDVNGWTALHWAASCGRERTVAVLVSMGADSGALTDPSPAFPSGRTPADLASNNGHKGISGFLAESSLTSHLEFLTMDDQHNGGREEISGIKAVQTVSERTATPVLYGDMPDALCLKDSLTAVRNATQAADRIHQVFRMQSFQRKQLTQYEDDEFGLSDQLALSLLASKAHKSGQGDGLANAAAVQIQKKFRGWKKRKEFLIIRQRIVKIQAHVRGHQVRKQYKTIIWSVGILEKVILRWRRKGSGLRGFRPEALNKVPSQENDPPKEDDYDYLKEGRKQSEEKIQKALSRVKSMVQYPEARAQYRRLLNVVEDFRQTKACNMGLISSEETVDGVEDLIDIDMLLDDDNFIPIAFD | 968 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi2552g00010 | 968 | ProSiteProfiles | IQ motif profile. | 792 | 821 | IPR000048 | GO:0005515 | |
Gabi2552g00010 | 968 | PANTHER | CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA | 1 | 930 | - | - | |
Gabi2552g00010 | 968 | MobiDBLite | consensus disorder prediction | 21 | 121 | - | - | |
Gabi2552g00010 | 968 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 793 | 842 | IPR027417 | - | |
Gabi2552g00010 | 968 | SUPERFAMILY | E set domains | 383 | 469 | IPR014756 | - | |
Gabi2552g00010 | 968 | ProSiteProfiles | Ankyrin repeat region circular profile. | 583 | 614 | - | - | |
Gabi2552g00010 | 968 | FunFam | Calmodulin-binding transcription activator 2 | 376 | 472 | - | - | |
Gabi2552g00010 | 968 | ProSiteProfiles | Ankyrin repeat profile. | 583 | 615 | IPR002110 | GO:0005515 | |
Gabi2552g00010 | 968 | Gene3D | - | 792 | 839 | - | - | |
Gabi2552g00010 | 968 | SMART | iq_5 | 814 | 836 | IPR000048 | GO:0005515 | |
Gabi2552g00010 | 968 | SMART | iq_5 | 791 | 813 | IPR000048 | GO:0005515 | |
Gabi2552g00010 | 968 | Pfam | IQ calmodulin-binding motif | 817 | 836 | IPR000048 | GO:0005515 | |
Gabi2552g00010 | 968 | Pfam | IQ calmodulin-binding motif | 794 | 812 | IPR000048 | GO:0005515 | |
Gabi2552g00010 | 968 | ProSiteProfiles | Ankyrin repeat region circular profile. | 616 | 642 | - | - | |
Gabi2552g00010 | 968 | Gene3D | - | 553 | 720 | IPR036770 | - | |
Gabi2552g00010 | 968 | MobiDBLite | consensus disorder prediction | 23 | 71 | - | - | |
Gabi2552g00010 | 968 | Gene3D | Immunoglobulins | 376 | 471 | IPR013783 | - | |
Gabi2552g00010 | 968 | FunFam | Calmodulin-binding transcription activator 2 | 791 | 839 | - | - | |
Gabi2552g00010 | 968 | FunFam | Calmodulin-binding transcription activator 2 | 557 | 742 | - | - | |
Gabi2552g00010 | 968 | SUPERFAMILY | Ankyrin repeat | 567 | 677 | IPR036770 | - | |
Gabi2552g00010 | 968 | SMART | ANK_2a | 655 | 684 | IPR002110 | GO:0005515 | |
Gabi2552g00010 | 968 | SMART | ANK_2a | 616 | 645 | IPR002110 | GO:0005515 | |
Gabi2552g00010 | 968 | SMART | ANK_2a | 583 | 612 | IPR002110 | GO:0005515 | |
Gabi2552g00010 | 968 | Pfam | IPT/TIG domain | 383 | 461 | IPR002909 | - | |
Gabi2552g00010 | 968 | ProSiteProfiles | Ankyrin repeat profile. | 616 | 648 | IPR002110 | GO:0005515 | |
Gabi2552g00010 | 968 | Pfam | Ankyrin repeats (3 copies) | 588 | 677 | IPR002110 | GO:0005515 | |
Gabi2552g00010 | 968 | ProSiteProfiles | IQ motif profile. | 815 | 839 | IPR000048 | GO:0005515 | |
Gabi2552g00010 | 968 | ProSiteProfiles | CG-1 DNA-binding domain profile. | 1 | 23 | IPR005559 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi2552g00010 | Gabi-Chr2552 | 38724 | 46500 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi2552g00010 | 1 | 932 | CAMTA Transcription Factor Family | AT5G64220 | 49.787 | 0.0 | 853 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi2552g00010 | K21596 | - | gmx:100818124 | 1497.64 |