Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2552g00005 ATGGCGGAGGAGAGAGGGGAGATCAATGGCGGATTCTCGATGGAATCCACCGAATCGAGGTGGGTTATACAGGAGGACGATGAGGATGCGTCCGATATAGAGGAGGATTTCGACGCTGATTTGAGATTGAGACGCCACCCTAGTATGCTTGATTCCGATGATGAGGATAATGCCGAGCAGAGACTCATTCGTACTGGTCCTCGAATCGATTCCTTCGATGTCGATGCTCTTGATGTCCCCGGTGCTACCAGAAATCACTATGAGGATATCAGTGTGGGAAAGCAAATTGTGTTGGCTTTTCAGACTCTTGGTGTTGTCTTTGGCGATGTTGGAACGAGTCCATTATATACCTTCAGTGTTATGTTTAGAAAGGCCCCTATTAATGGAAATGAAGACATTCTTGGAGCATTATCACTTGTCTTGTACACTTTAATTTTGATTCCTTTAGTGAAGTATGTGCTGGTTGTTCTGTGGGCCAATGATGATGGTGAAGGTGGTACTTTTGCCTTGTACTCCTTGATCTGTCGTCATGCTAAGGTGAGTCTTCTCCCTAATCAGTTACCATCAGATGCCCGTATATCAAGCTTTAGGCTAAAGGTGCCATCCCCTGAGCTGGAAAGGTCATTAAAAATCAAGGAAAGACTTGAGACTTCTTTGACTCTGAAGAAGATTTTACTTATATTAGTGCTTGCTGGTACTTCTATGGTGATTGCTAACGGTGTTGTTACACCAGCAATGTCAGTACTGTCATCTGTTGGTGGATTAAAAGTTGGGGTAGATGCAATCAAGCAAGATGAAGTGGTGATGATTTCGGTTGCCTGCCTTGTCATTTTGTTCAGTGTACAGAAGTATGGAACAAGTAAAGTGGGACTTGCAGTAGGACCTGCTTTGTTCATATGGTTTTGTTCTCTTGCTGGTATCGGGGTATACAATCTTCTCAAATATGACAGTAGTGTCTTGAGGGCATTTAATCCAATTCACATCTACTATTTCTTCAAGAGGAACTCAACTAAAGCATGGTATTCTCTTGGGGGTTGTCTTCTGTGTGCGACTGGTTCGGAGGCCATGTTTGCAGACCTTTGCTACTTTCCTGTACGATCAGTTCAGCTTTCATTTGTCTTTCTTGTTTTGCCATGCCTACTACTGGGTTATTTGGGTCAAGCGGCATACCTTATGGAAAACCATGATGATGCTGGTCAAGCCTTTTTTTCTTCTGTTCCAAGTGGAGCATTCTGGCCAACTTTCCTCATTGCCAACATTGCTGCACTGATTGCAAGTCGGGCTATGACAACAGCAACATTTTCATGTATTAAACAATCGACTGCACTTGGTTGTTTTCCTCGTCTGAAAATCATTCACACCTCTCGGAAATTTATGGGCCAGATCTATATCCCTGTCATAAACTGGTTTCTGTTGGCTGTTTCTTTGGTGTTTGTCTGCTCTATATCCAGCATTGATGAGATTGGAAATGCTTATGGCATTGCTGAGGTGGGGGTGATGATGATGACCACTATTTTAGTAACCCTTGTTATGCTTCTTATATGGCAGATACACATCATCATAGTACTGTGTTTCATGGTAGTCTTCTTGGGATTGGAATTGACTTTCTTTTCATCTGTTTTGTGGAGTGTGGCGGATGGAAGTTGGATTATATTGGTCTTTGCCGCTATAATGTTTCTTATAATGTATGTATGGAATTATGGAAGCAATCTCAAGTATGAAACTGAAGTCAAGCAAAAACTTTCAATGGATTTGATGCGAGAATTAGGTAGTAATCTTGGGACAATACGAGCTCCTGGGATTGGTCTACTCTATAATGAGTTGGTCAAAGGAATACCGGCAATTTTTGGCCATTTTCTGACAACACTTCCTGCAATCCATTCCATGATTATATTTGTGAGTATTAAATATGTTCCGGTTCCTATGGTACCTCAAAGTGAAAGGTTCCTTTTCCGACGAGTCTGCCCAAAAAGTTATCATATATTTCGTTGTATTGCCAGGTATGGTTACAAAGATGTTCGTAAAGAAAATCATCAGACTTTTGAGCAGCTGTTGATTGAGAGCCTAGAGAAGTTTATACGTCGAGAGACCCAGGAGAGGTCATTGGAGAGTGATGGGGATGATGATATGGATTTAGAGGATGATTACTCTGGTTCTAGGGTTCTCATAGCTCCCAACGGGAGTGTTTACTCACTTAATGTTCCTCTTCTCGCTGATTTTAAGGATACAAGCAATCCCGTTTTAGAAGCAAGCACATCAGAGGTGGTAAGCCCAACATCCTCTATTCCCCCGGTGTTTGATGCTGAGCAGAGTCTTGAGAGGGAGTTATCTTTTATTCGCAAGGCTAGAGAATCTGGAGTTGTTTATCTTCTTGGTCATGGGAATATAAGGGCAAGGAAGGACTCATGGTTTATCAAAAAGCTAGTTATAAATTATTTTTATGCCTTTTTGAGAAAGAATTGCAGGAGGGGGATCACGAATTTAAGCGTACCCCACTCACATCTGATGCAAGTTGGCATGACTTACATGGTTTGA 2535 0.4197 MAEERGEINGGFSMESTESRWVIQEDDEDASDIEEDFDADLRLRRHPSMLDSDDEDNAEQRLIRTGPRIDSFDVDALDVPGATRNHYEDISVGKQIVLAFQTLGVVFGDVGTSPLYTFSVMFRKAPINGNEDILGALSLVLYTLILIPLVKYVLVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDARISSFRLKVPSPELERSLKIKERLETSLTLKKILLILVLAGTSMVIANGVVTPAMSVLSSVGGLKVGVDAIKQDEVVMISVACLVILFSVQKYGTSKVGLAVGPALFIWFCSLAGIGVYNLLKYDSSVLRAFNPIHIYYFFKRNSTKAWYSLGGCLLCATGSEAMFADLCYFPVRSVQLSFVFLVLPCLLLGYLGQAAYLMENHDDAGQAFFSSVPSGAFWPTFLIANIAALIASRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVINWFLLAVSLVFVCSISSIDEIGNAYGIAEVGVMMMTTILVTLVMLLIWQIHIIIVLCFMVVFLGLELTFFSSVLWSVADGSWIILVFAAIMFLIMYVWNYGSNLKYETEVKQKLSMDLMRELGSNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSMIIFVSIKYVPVPMVPQSERFLFRRVCPKSYHIFRCIARYGYKDVRKENHQTFEQLLIESLEKFIRRETQERSLESDGDDDMDLEDDYSGSRVLIAPNGSVYSLNVPLLADFKDTSNPVLEASTSEVVSPTSSIPPVFDAEQSLERELSFIRKARESGVVYLLGHGNIRARKDSWFIKKLVINYFYAFLRKNCRRGITNLSVPHSHLMQVGMTYMV 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2552g00005 844 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 94 842 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gabi2552g00005 844 NCBIfam potassium uptake protein 98 844 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gabi2552g00005 844 MobiDBLite consensus disorder prediction 1 30 - -
Gabi2552g00005 844 Pfam K+ potassium transporter 99 672 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2552g00005 Gabi-Chr2552 23198 30842 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2552g00005 3 844 Inorganic Solute Cotransporters AT5G09400 78.378 0.0 1318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2552g00005 - - gmx:100788008 1445.25