Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2548g00002 GTGCAGCTTCTTGGCAGAGTGTTTAACATTCTACGTGAGAATAATCCAGAACTTGCTGGAGACCGTCGGAGGACTGTTATGAGGCCTCCACAAGTTCTACGGGAGGGCACTAAGAAAACTGTCTTCGTGAATTTTAAGGATCTATGCAAAACGATGCATCGGCAGCCAGACCATGTCATGGCTTTCTTGCTTGCTGAACTGGGTACTAGTGGCTCTCTAGATGGACAGCAGAGATTGGTTGTGAAGGGAAGATTTGCACCCAAGAACTTTGAAGGAATTCTAGGACGATATGTCAATGAGTATGTCATTTGCCTTGGATGCAAAAGTCCTGACAGAATCCTTTCTAAGGAGAACCGTTTGTTCTTTCTCCGATGTGAAAAGTGTGGATCAGGAAGATCAGTTGCTCAAATCAAAGCTGGTTTTGTTGCTCGTGTTGGCCGTAGGAACGCGGGGACATGA 459 0.4597 VQLLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFKDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILGRYVNEYVICLGCKSPDRILSKENRLFFLRCEKCGSGRSVAQIKAGFVARVGRRNAGT 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2548g00002 152 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 151 IPR045196 GO:0003743|GO:0006413
Gabi2548g00002 152 FunFam Eukaryotic translation initiation factor 2 subunit 1 137 - -
Gabi2548g00002 152 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 101 136 IPR016190 GO:0003743|GO:0006413
Gabi2548g00002 152 Gene3D - 1 137 - -
Gabi2548g00002 152 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 2 104 IPR016189 GO:0003743|GO:0006413
Gabi2548g00002 152 Pfam Domain found in IF2B/IF5 21 130 IPR002735 GO:0003743|GO:0006413
Gabi2548g00002 152 SMART eIF2Bneu4 22 131 IPR002735 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2548g00002 Gabi-Chr2548 24565 26784 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2548g00002 2 148 Eukaryotic Initiation Factors Gene Family AT5G20920 91.156 7.66e-98 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2548g00002 K03238 - qsa:O6P43_020467 297.36