Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2546g00011 ATGAAGGAAAACAGTGATGGGTTTGTGAGGGCTGATCAGATTGATCTGAAGAGCATAGATGAACAGTTAGAGAGGCACCTAAACAAGGCATTGACTATTGAGAAGAAGAAGCAGAGAGAGGAAGATGGTTGGGAAATTGACCCTTCTAACCTCATCATCAAGAGTGTCATAGCTCGTGGCACTTTCGGTACTGTTCACCGTGGTGTCTATGATGGCCAAGATGTCGCTGTTAAAATGCTGGACTGGGGTGAAGAAGGGCAACGGACAGAAGCTGAAATTGCTTCCCTTAGGTCGGCATTTACACAAGAAGTTGCTGTTTGGCATAAACTTGATCATCCTAATGTCACTAAGTTTATAGGGGCAACAATGGGGTCTTCAGAATTACAGATACAAACCGATAATGGTCTAATTAGCATGCCAAGCAATATCTGCTGTGTAGTTGTAGAGTATCTTGCTGGAGGTGCCCTCAAATCTTTCCTAATAAAGAATAGGAGGAGGAAGTTAGCTTTTAAGGTTGTCATCCAGCTGGCACTTGATCTTGCGCGAGGGCTGAGTTATCTTCACTCTCAGAAAATTGTCCACAGAGATGTAAAGACCGAGAACATGCTGTTGGATAAGACACGCACAGTTAAAATTGCTGATTTTGGGGTTGCACGTGTTGAAGCGTCAAATCCTAATGACATGACTGGGGAGACTGGTACACTTGGTTACATGGCTCCTGAGGTTTTAAATGGCAACCCCTATAACAGGAAATGTGATGTGTACAGTTTTGGCATATGTTTATGGGAAATATATTGTTGTGACATGCCATATCCTGACCTAAGTTTCTCAGAGATTACTTCAGCTGTTGTTCGCCAGAATCTGAGACCAGAAATTCCAAGATGTTGCCCAAGTTCTCTGGCAAATGTAATGAAGAGATGCTGGGATGCCAATCATGATAAACGGCCTGAAATGGATGAGGTAGTTTCCATGCTGGAGGCTATTGACACATCCAAAGGTGGAGGTATGATCCCTGTTGATCAGCAACAGGGTTGTCTTTGCTTCCGTAAGTACAGAGGGCCTTGA 1065 0.4376 MKENSDGFVRADQIDLKSIDEQLERHLNKALTIEKKKQREEDGWEIDPSNLIIKSVIARGTFGTVHRGVYDGQDVAVKMLDWGEEGQRTEAEIASLRSAFTQEVAVWHKLDHPNVTKFIGATMGSSELQIQTDNGLISMPSNICCVVVEYLAGGALKSFLIKNRRRKLAFKVVIQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEITSAVVRQNLRPEIPRCCPSSLANVMKRCWDANHDKRPEMDEVVSMLEAIDTSKGGGMIPVDQQQGCLCFRKYRGP 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2546g00011 354 Gene3D Transferase(Phosphotransferase) domain 1 152 343 - -
Gabi2546g00011 354 Coils Coil 16 36 - -
Gabi2546g00011 354 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 43 328 - -
Gabi2546g00011 354 SUPERFAMILY Protein kinase-like (PK-like) 39 325 IPR011009 -
Gabi2546g00011 354 CDD STKc_MAP3K-like 57 325 - -
Gabi2546g00011 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Gabi2546g00011 354 PIRSF ILK 17 334 - -
Gabi2546g00011 354 Gene3D Phosphorylase Kinase; domain 1 31 133 - -
Gabi2546g00011 354 ProSiteProfiles Protein kinase domain profile. 51 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2546g00011 354 Pfam Protein tyrosine and serine/threonine kinase 53 325 IPR001245 GO:0004672|GO:0006468
Gabi2546g00011 354 FunFam Kinase suppressor of Ras 1 40 135 - -
Gabi2546g00011 354 FunFam Serine/threonine-protein kinase HT1 151 336 - -
Gabi2546g00011 354 PRINTS Tyrosine kinase catalytic domain signature 186 204 IPR001245 GO:0004672|GO:0006468
Gabi2546g00011 354 PRINTS Tyrosine kinase catalytic domain signature 148 161 IPR001245 GO:0004672|GO:0006468
Gabi2546g00011 354 PRINTS Tyrosine kinase catalytic domain signature 296 318 IPR001245 GO:0004672|GO:0006468
Gabi2546g00011 354 PRINTS Tyrosine kinase catalytic domain signature 252 274 IPR001245 GO:0004672|GO:0006468
Gabi2546g00011 354 SMART serkin_6 51 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2546g00011 Gabi-Chr2546 121376 126126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2546g00011 6 354 MAP Kinase Kinase Kinase AT3G22750 68.732 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Gabi2546g00011 PK_Tyr_Ser-Thr 1.6e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2546g00011 - - csv:101209182 665.996