Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2544g00031 ATGAGAGAAGTTTGTCATCTTCACATGGATATTGCATACGCCAAGCTGGCTCATTTGGCTCCACAGTATGGACTATACTCCAGCTTTGTTCCACCACTGATTTATGCTGTCATGGGTAGTTCTCGTGATATTGCAATAGGACCAGTGGCAGTGGTTTCTCTCTTGTTAGGGACCTTACTTAGTAATGAGATTGATCCTGTTACACATGCAGCAGAATATCGACGTCTTGCTTTTACAGCCACTTTTTTTGCTGGGATTACCCAAGCAACGCTTGGGGTTTTTAGGTTAGGATTCTTGATTGACTTCTTATCCCATGCTGCTATTGTCGGTTTTATGGGGGGTGCTGCCATCACAATTGCCCTTCAACAGCTTAAGGGTTTTCTTGGCATTAAAAGTAAAATGTTCACAACGAAAACTGATATTGTCTCTGTGTTGAAGTCAGTATTCTCATCAGCACATCATGGATGGAACTGGCAAACTATACTCATCGGAGCTAGTTTTTTGGGTTTTCTTCTGGTTGCCAAATATATCGGAAAGAAGAACAAGAAATTCTTCTGGGTGCCAGCAATCGCCCCATTAATATCCGTTGTGTTGTCCACTTTTTTTGTATTCATAACCCGAGCAGATAAGCAAGGAGTAGAAATTGTAAGACACATAGAGAAAGGGATCAATCCTTCATCAGTTAAAGAAATTTATTTTAGCGGTGAATACCTTGGTAAAGGTTTTAGGATTGGCATCGTGGCAGGGATGATAGCATTGACTGAAGCCATAGCAATTGGAAGAACATTTGCATCTATGAAGGACTATCAACTGGATGGAAACAAAGAAATGATGGCATTAGGAGCAATGAATGTTGTTGGTTCGATGACTTCCTGTTATGTGGCAACCGGTTCTTTCTCTCGGTCAGCGGTAAATTTTATGGCTGGTTGCCAAACTGCAGTTTCTAATATTGTGATGTCAATAGTTGTGTTCTTAACCCTGCAATTCATAACTCCTCTATTTAAGTACACTCCAAATGCCATTCTTGCTGCCATCATCATTTCTGCTGTCATCAACCTTGTGGACTATCAGGCAGCGATTTTGATTTGGAAGATTGATAAACTTGATTTTGTTGCTTGCATGGGAGCATTCTTTGGGGTTGTTTTTGCCACGGTTGAGATAGGACTTCTAATTGCTGTCTCTATATCCTTTGCGAAGATCCTACTACAAGTCACAAGGCCCCGAACTGCTATTCTTGGGAAGATTCCAAGAACTTCCGTCTATAGAAACATCCAACAATACCCAGAAGCTAGTAAGGTTCCAGGTGTACTGATTGTAAGAGTCGATTCGGCAATATATTTTTCCAACTCCAATTATGTTAAAGAAAGAATATTAAGATGGCTGATAGATGAAGACGAAAAAGTGAAAGGAGACTACCACACAAAAATCCAGTTTTTGATAGTTGAAATGTCACCTGTTACTGACATCGACACTAGCGGCATCCAAGCCTTTGAAGAGTTACACAGAAGTCTTACGAAGAGAAGTGTTGAGCTTGTTCTGGCAAATCCTGGCCCGGCAGTGATAGACAAGCTTTACACATCCAATTTTGCGAACTCGATTGGGGAGGACAAGATCTTCCTCACAGTTGCAGAGGCTGTTGCATACTGTTCTCCAAACCTGGCTGAGTACCCATGA 1674 0.414 MREVCHLHMDIAYAKLAHLAPQYGLYSSFVPPLIYAVMGSSRDIAIGPVAVVSLLLGTLLSNEIDPVTHAAEYRRLAFTATFFAGITQATLGVFRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKSKMFTTKTDIVSVLKSVFSSAHHGWNWQTILIGASFLGFLLVAKYIGKKNKKFFWVPAIAPLISVVLSTFFVFITRADKQGVEIVRHIEKGINPSSVKEIYFSGEYLGKGFRIGIVAGMIALTEAIAIGRTFASMKDYQLDGNKEMMALGAMNVVGSMTSCYVATGSFSRSAVNFMAGCQTAVSNIVMSIVVFLTLQFITPLFKYTPNAILAAIIISAVINLVDYQAAILIWKIDKLDFVACMGAFFGVVFATVEIGLLIAVSISFAKILLQVTRPRTAILGKIPRTSVYRNIQQYPEASKVPGVLIVRVDSAIYFSNSNYVKERILRWLIDEDEKVKGDYHTKIQFLIVEMSPVTDIDTSGIQAFEELHRSLTKRSVELVLANPGPAVIDKLYTSNFANSIGEDKIFLTVAEAVAYCSPNLAEYP 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2544g00031 557 SUPERFAMILY SpoIIaa-like 428 550 IPR036513 -
Gabi2544g00031 557 Pfam Sulfate permease family 9 374 IPR011547 GO:0016020
Gabi2544g00031 557 Gene3D STAS domain 406 552 IPR036513 -
Gabi2544g00031 557 NCBIfam sulfate permease 10 545 IPR001902 GO:0016020|GO:0055085
Gabi2544g00031 557 Pfam STAS domain 427 545 IPR002645 -
Gabi2544g00031 557 CDD STAS_SulP_like_sulfate_transporter 427 542 - -
Gabi2544g00031 557 ProSitePatterns SLC26A transporters signature. 21 42 IPR018045 GO:0008271|GO:0008272
Gabi2544g00031 557 FunFam Sulfate transporter 31 406 552 - -
Gabi2544g00031 557 PANTHER SULFATE TRANSPORTER 9 550 IPR001902 GO:0016020|GO:0055085
Gabi2544g00031 557 ProSiteProfiles STAS domain profile. 426 549 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2544g00031 Gabi-Chr2544 278019 283988 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2544g00031 10 555 Inorganic Solute Cotransporters AT1G22150 78.755 0.0 849
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2544g00031 K17470 - gmx:100804208 961.829