Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2544g00029 ATGTCTTCAATGGGTCCTGCTGCTGATGAAAATCTTGAAACAAAAGGGATAGATGAGAGAAGTTTGTCATCTTCACATGGTAATGCACCATACGTCCACAAAGTGGCAATTCCTCCAAGACAGAACCTCTTCAAGGAATTCCAATCCACTATAAAAGAAACATTCTTTGCTGATGATCCTCTACGATCCTTCAAAGATCAAACAAAGTCTCGGAAGCTCATCCTCGGTATTGAGGCTATATTCCCCATACTTAATTGGGGGAGAGCTTACAACCTTAAAAAATTTAGAGGAGATATTATATCTGGTCTCACTATTGCAAGTCTTTGCATTCCTCAGGATATTGCATACGCCAAGCTGGCTCATTTGGCTCCACAGTATGGACTATACTCCAGCTTTGTTCCACCACTGATTTATGCTGTCATGGGTAGTTCTCGTGATATTGCAATAGGACCAGTGGCAGTGGTTTCTCTCTTGTTAGGGACCTTACTTAGTAATGAGATTGATCCTGTTACACATGCAGCAGAATATCGACGTCTTGCTTTTACAGCCACTTTTTTTGCTGGGATTACCCAAGCAACGCTTGGGGTTTTTAGGTTAGGATTCTTGATTGACTTCTTATCCCATGCTGCTATTGTCGGTTTTATGGGGGGTGCTGCCATCACAATTGCCCTTCAACAGCTTAAGGGTTTTCTTGGCATTAAAAGTAAAATGTTCACAACGAAAACTGATATTGTCTCTGTGTTGAAGTCAGTATTCTCATCAGCACATCATGGATGGAACTGGCAAACTATACTCATCGGAGCTAGTTTTTTGGGTTTTCTTCTGGTTGCCAAATATATCGGAAAGAAGAACAAGAAATTCTTCTGGGTGCCAGCAATCGCCCCATTAATATCCGTTGTGTTGTCCACTTTTTTTGTATTCATAACCCGAGCAGATAAGCAAGGAGTAGAAATTGTAAGACACATAGAGAAAGGGATCAATCCTTCATCAGTTAAAGAAATTTATTTTAGCGGTGAATACCTTGGTAAAGGTTTTAGGATTGGCATCGTGGCAGGGATGATAGCATTGACTGAAGCCATAGCAATTGGAAGAACATTTGCATCTATGAAGGACTATCAACTGGATGGAAACAAAGAAATGATGGCATTAGGAGCAATGAATGTTGTTGGTTCGATGACTTCCTGTTATGTGGCAACCGGTTCTTTCTCTCGGTCAGCGGTAAATTTTATGGCTGGTTGCCAAACTGCAGTTTCTAATATTGTGATGTCAATAGTTGTGTTCTTAACCCTGCAATTCATAACTCCTCTATTTAAGTACACTCCAAATGCCATTCTTGCTGCCATCATCATTTCTGCTGTCATCAACCTTGTGGACTATCAGGCAGCGATTTTGATTTGGAAGATTGATAAACTTGATTTTGTTGCTTGCATGGGAGCATTCTTTGGGGTTGTTTTTGCCACGGTTGAGATAGGACTTCTAATTGCTGTCTCTATATCCTTTGCGAAGATCCTACTACAAGTCACAAGGCCCCGAACTGCTATTCTTGGGAAGATTCCAAGAACTTCCGTCTATAGAAACATCCAACAATACCCAGAAGCTAGTAAGGTTCCAGGTGTACTGATTGTAAGAGTCGATTCGGCAATATATTTTTCCAACTCCAATTATGTTAAAGAAAGAATATTAAGATGGCTGATAGATGAAGACGAAAAAGTGAAAGGAGACTACCACACAAAAATCCAGTTTTTGATAGTTGAAATGTCACCTGTTACTGACATCGACACTAGCGGCATCCAAGCCTTTGAAGAGTTACACAGAAGTCTTACGAAGAGAAGTGTTGAGCTTGTTCTGGCAAATCCTGGCCCGGCAGTGATAGACAAGCTTTACACATCCAATTTTGCGAACTCGATTGGGGAGGACAAGATCTTCCTCACAGTTGCAGAGGCTGTTGCATACTGTTCTCCAAACCTGGCTGAGTACCCATGA 1983 0.412 MSSMGPAADENLETKGIDERSLSSSHGNAPYVHKVAIPPRQNLFKEFQSTIKETFFADDPLRSFKDQTKSRKLILGIEAIFPILNWGRAYNLKKFRGDIISGLTIASLCIPQDIAYAKLAHLAPQYGLYSSFVPPLIYAVMGSSRDIAIGPVAVVSLLLGTLLSNEIDPVTHAAEYRRLAFTATFFAGITQATLGVFRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKSKMFTTKTDIVSVLKSVFSSAHHGWNWQTILIGASFLGFLLVAKYIGKKNKKFFWVPAIAPLISVVLSTFFVFITRADKQGVEIVRHIEKGINPSSVKEIYFSGEYLGKGFRIGIVAGMIALTEAIAIGRTFASMKDYQLDGNKEMMALGAMNVVGSMTSCYVATGSFSRSAVNFMAGCQTAVSNIVMSIVVFLTLQFITPLFKYTPNAILAAIIISAVINLVDYQAAILIWKIDKLDFVACMGAFFGVVFATVEIGLLIAVSISFAKILLQVTRPRTAILGKIPRTSVYRNIQQYPEASKVPGVLIVRVDSAIYFSNSNYVKERILRWLIDEDEKVKGDYHTKIQFLIVEMSPVTDIDTSGIQAFEELHRSLTKRSVELVLANPGPAVIDKLYTSNFANSIGEDKIFLTVAEAVAYCSPNLAEYP 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2544g00029 660 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271|GO:0008272
Gabi2544g00029 660 MobiDBLite consensus disorder prediction 1 26 - -
Gabi2544g00029 660 SUPERFAMILY SpoIIaa-like 531 653 IPR036513 -
Gabi2544g00029 660 Gene3D STAS domain 509 655 IPR036513 -
Gabi2544g00029 660 ProSiteProfiles STAS domain profile. 529 652 IPR002645 -
Gabi2544g00029 660 PANTHER SULFATE TRANSPORTER 41 653 IPR001902 GO:0016020|GO:0055085
Gabi2544g00029 660 NCBIfam sulfate permease 82 648 IPR001902 GO:0016020|GO:0055085
Gabi2544g00029 660 FunFam Sulfate transporter 31 509 655 - -
Gabi2544g00029 660 Pfam Sulfate permease family 95 477 IPR011547 GO:0016020
Gabi2544g00029 660 Pfam STAS domain 530 648 IPR002645 -
Gabi2544g00029 660 CDD STAS_SulP_like_sulfate_transporter 530 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2544g00029 Gabi-Chr2544 277045 283988 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2544g00029 1 658 Inorganic Solute Cotransporters AT1G22150 75.988 0.0 997
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2544g00029 K17470 - gmx:100804208 1147.11