Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2544g00027 ATGAGTTCAGTGTCCATTGATGCTTCCAGTGTGAGAGTCAGAGAACTGGGGCACTTTCATATCGAGGATACTGATCAAACAGAGAGGTCCCAGTGGATGCTGAATTCTCCCAATCCACCACCTCTATGGAAGAGGCTATTTCGTCCACTGAAAGACACCAAGTTCTTTTTTTCATCCAAGAAGAAAACTTGCCATGGAAATGCTGTTTCATTTTTGGGGAGTTTATTCCCTATCCTTAGCTGGCTCAGAAATTACAAAGCCTCCATGTTCAAAGATGATTTGCTAGCAGGTTTAACTCTTGCCAGCCTCAGCATACCTCAGAGTATAGGATATGCTAATTTAGCAAGACTTGATCCTCAATATGGATTGTACACCAGTGTTGTTCCTCCTCTTATCTATGCTCTGATGGGGAGCTCAAGAGAAATTGCAATTGGACCTGTAGCTGTAGTGTCATTGCTGCTATCCTCCCTTGTCCAGAAAGTGGTAGATCCTGCTGCTAATCCTGATGCCTACAGAAATGTTGTCTTTACAGTGACCTTATTTGCTGGAATCTTTCAAACTGCATTCGGAGTTTTCAGGTTGGGTTTTCTTGTGGATTTTCTTTCACATGCTGCCCTTGTAGGATTCATGGCAGGTGCAGCCATCATTATTGGTCTTCAGCAACTCAAGGGGTTGCTGGGGCTTACTCACTTTACCACCAAAACTGATGCAGTGTCGGTGTTGGAATCTGTTTATAAGTCACTCCATCATCAAATTACATCTGCAGAAAAGGGCAGAAAAAACAAAAAACTTTTCTGGTTGCCTGCTGTTGCTCCTCTTCTATCAGTTATATTATCAACTTTAATTGTGTATTTGTCCAAAGCTGATAAGAATGGGGTTAATATAATAAAGCATGTCAAAGGAGGCCTGAATCCAAGTTCGGCTCACCAGTTACAATTCCATGGTCAACATGTTGGACAAGCAGCTAAAATTGGATTGATTTCGGCCATCATTGCTCTTACTGAAGCAATAGCTGTTGGTCGATCTTTTGCTTCCATTAAGGGATACCATCTTGATGGGAACAAAGAAATGTTAGCAATGGGCTGTATGAACATTGCAGGATCTTTCACTTCATGTTATGTGGCAACAGGTTCTTTCTCAAGGACTGCAGTGAATTTCAGTGCAGGATGTCAAACAGCAGTATCAAATATTGTGATGGCCGTTACTGTGCTTCTGTGTTTGGAATTGTTCACAAGGCTCTTATACTACACTCCTATGGCCATACTTGCTTCTATCATCCTCTCTGCACTTCCTGGATTAATTGACATACGTGAAGCTTGCTATATCTGGAAGGTTGACAAATTAGACTTCCTTGCCTGCATTGGTGCTTTCTTTGGTGTCTTGTTTGCATCGGTAGAGATTGGTCTTCTTGTTGCAGTGTCAATCTCGTTTGCAAAGATACTAATGCAATCAATTCGACCTGGAATAGAAGTACTAGGTAGAGTTCCAAGGACAGAGGCTTTCTGCGATGTTAGTCAATATCCAATGGCCATAAGCACTCCAGGAATCTTGGTTATTCGCATAAGCTCTGGCTCACTCTGCTTTGCTAATGCTAGTTTTGTTAGAGAAAGAATAGTGAAGTGGGTCACGGAAGAAGAAGATAGCCTTAAAGAAACTGACAAGGGAAGGGTCCAAGCAGTAATCTTGGACATGACAAACCTGATGAATGTTGATACTTCCGGAATTCTAGCACTGGAGGAACTGCACAAGAGGTTGCTTTCGTGTGAAGTAGAATTGGCATTGGTCAACCCGAGGTGGCTAGTAATTCACAAGCTTAAAGTGGCTCACTTCGTGGATAAAATCGGAAAAGAATGGGTTTTCCTTACTGTTGCGGAAGCCGTAGATGCATGTCTGTCTTCTAAATTCGCTGACCCATGA 1917 0.4236 MSSVSIDASSVRVRELGHFHIEDTDQTERSQWMLNSPNPPPLWKRLFRPLKDTKFFFSSKKKTCHGNAVSFLGSLFPILSWLRNYKASMFKDDLLAGLTLASLSIPQSIGYANLARLDPQYGLYTSVVPPLIYALMGSSREIAIGPVAVVSLLLSSLVQKVVDPAANPDAYRNVVFTVTLFAGIFQTAFGVFRLGFLVDFLSHAALVGFMAGAAIIIGLQQLKGLLGLTHFTTKTDAVSVLESVYKSLHHQITSAEKGRKNKKLFWLPAVAPLLSVILSTLIVYLSKADKNGVNIIKHVKGGLNPSSAHQLQFHGQHVGQAAKIGLISAIIALTEAIAVGRSFASIKGYHLDGNKEMLAMGCMNIAGSFTSCYVATGSFSRTAVNFSAGCQTAVSNIVMAVTVLLCLELFTRLLYYTPMAILASIILSALPGLIDIREACYIWKVDKLDFLACIGAFFGVLFASVEIGLLVAVSISFAKILMQSIRPGIEVLGRVPRTEAFCDVSQYPMAISTPGILVIRISSGSLCFANASFVRERIVKWVTEEEDSLKETDKGRVQAVILDMTNLMNVDTSGILALEELHKRLLSCEVELALVNPRWLVIHKLKVAHFVDKIGKEWVFLTVAEAVDACLSSKFADP 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2544g00027 638 ProSitePatterns SLC26A transporters signature. 119 140 IPR018045 GO:0008271|GO:0008272
Gabi2544g00027 638 ProSiteProfiles STAS domain profile. 523 630 IPR002645 -
Gabi2544g00027 638 CDD STAS_SulP_like_sulfate_transporter 507 623 - -
Gabi2544g00027 638 PANTHER SULFATE TRANSPORTER 58 631 IPR001902 GO:0016020|GO:0055085
Gabi2544g00027 638 Pfam Sulfate permease family 90 454 IPR011547 GO:0016020
Gabi2544g00027 638 Gene3D STAS domain 486 633 IPR036513 -
Gabi2544g00027 638 Pfam STAS domain 507 626 IPR002645 -
Gabi2544g00027 638 FunFam Sulfate transporter 31 486 633 - -
Gabi2544g00027 638 NCBIfam sulfate permease 77 626 IPR001902 GO:0016020|GO:0055085
Gabi2544g00027 638 SUPERFAMILY SpoIIaa-like 513 630 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2544g00027 Gabi-Chr2544 251337 255651 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2544g00027 25 634 Inorganic Solute Cotransporters AT5G10180 64.297 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2544g00027 K17469 - gmx:100805269 1041.95