Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2544g00026 ATGTCATCGTCATCGAATTCTCAGTGTGCAGCATGCATGTATCAGCGCAGAGAATGCACCCAGGAATGCATTTTCGCGCCGTATTTTCCGTCTGACAACCCACAGAGGTTTGCCAAGGTGGACCAGGTGTTCGGAGCGAATAATGTGGCCAACCTTCTAAGCGAGGTGAACGCGGCGCAGCGTGAAAATGCTGTCGAGTCAATGGTTTATGAGGCAGAGTTACGCCTGCGAGATCCAGTCTATGGTTGCCTTCGTGTGGTCTCTGTTCTCCAACAAAGACTGAAACAATTGCAGACTCAACTCTTGTATGCTAGGAATGTACTTGTCTCCTACACCGGAGAGCAGGCTATCATACCACCATCTTCTCTTACCAATTTCCACCAATTACCCCCCACTACTTCTCCTCTTCCTCTTTTTCCCTTCAACGATATCATTTCTCCTCAAGAGGTTTTTGCTTCTCAAAACCACATGTCTCTAATTTCACCTTCTCTGGTCACCGCTGACAATTCTCATGGTCAAATTCAAAATAACCAGCATCCTCTTCATCATGACCAAATGCTTTCACCACAATCATATGAGTTTGAGGAGCAGCCTAATTCCGAAAGCGACGAGAGTACAAGCACTGATCCATCTTATTAA 639 0.4617 MSSSSNSQCAACMYQRRECTQECIFAPYFPSDNPQRFAKVDQVFGANNVANLLSEVNAAQRENAVESMVYEAELRLRDPVYGCLRVVSVLQQRLKQLQTQLLYARNVLVSYTGEQAIIPPSSLTNFHQLPPTTSPLPLFPFNDIISPQEVFASQNHMSLISPSLVTADNSHGQIQNNQHPLHHDQMLSPQSYEFEEQPNSESDESTSTDPSY 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2544g00026 212 MobiDBLite consensus disorder prediction 168 196 - -
Gabi2544g00026 212 MobiDBLite consensus disorder prediction 168 212 - -
Gabi2544g00026 212 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 6 192 - -
Gabi2544g00026 212 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Gabi2544g00026 212 Pfam Lateral organ boundaries (LOB) domain 8 104 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2544g00026 Gabi-Chr2544 190753 191391 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2544g00026 3 131 AS2 family AT5G66870 57.364 4.93e-47 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gabi2544g00026 LOB 1e-36 No_clan