Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2540g00004 ATGGGAGTTAGTGGAAGTAAGTTATGGAAATGGGTTGGTGGTGGTGGTAGTGGCAGTGCTTACAACAGCATGGAAGGTCCTCTATTGGCTCCTAGAGGTTATGTTCCAATTTATGTTGGCACAAATGAAGGTACTTGCAGGAGATTTATGGTTCACATCAAAGCACTTGGTGATGCAGATTTCAGCCAGATGCTTGGTAGGTCTGCAGAGGAATATGGGTTTAGGAATGAAGGAGTTCTTAGGATCCCATTTGAAGCACAAGATTTTGAAGAGTGGTTGATTAGAAGGTCCAACCAAAAGACTAAGAGGAGGGTAAAACCAACTTGA 327 0.4312 MGVSGSKLWKWVGGGGSGSAYNSMEGPLLAPRGYVPIYVGTNEGTCRRFMVHIKALGDADFSQMLGRSAEEYGFRNEGVLRIPFEAQDFEEWLIRRSNQKTKRRVKPT 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2540g00004 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 23 93 IPR003676 GO:0009733
Gabi2540g00004 108 Pfam Auxin responsive protein 30 93 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2540g00004 Gabi-Chr2540 30779 31105 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2540g00004 19 93 Calmodulin-binding Proteins AT3G43120 36.000 3.49e-10 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2540g00004 K14488 - gmx:102666083 142.895