Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2540g00003 ATGGCCAAAGTTGGAAAGCTAACAAAGATCAAGTCAGCGATCAAAAGGTGGCCCTCACTTACCAAGCTCAGCCGCAACAACAGCTCTGTCTCCGCCACCAAGGAAGGCGGCAGCGCCTCCTCCTCCTCCTCCAAGGAACAGGAACAACAACAACAACTCCACGCCGTCTACGTTGGCAAGTCCCGGAGGCGGTACCTCGTGAACTCCGAAGTCATAGATCACCCTGTGTTTCAGGAGCTAGTGGATAAGTCTTCTTCTAGTGGTTGTGATGATGGGGTTGTGGTTTCATGTGAGGTGGTGCTTTTTGAGCACTTGTTGTGGATGCTTGAGGGCAATGAGACCCAGTTGGGGTCCATGGATGAGCTTGTTGAGTTCTACTCTTGTGCATGCTGA 393 0.5191 MAKVGKLTKIKSAIKRWPSLTKLSRNNSSVSATKEGGSASSSSSKEQEQQQQLHAVYVGKSRRRYLVNSEVIDHPVFQELVDKSSSSGCDDGVVVSCEVVLFEHLLWMLEGNETQLGSMDELVEFYSCAC 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2540g00003 130 PANTHER EXPRESSED PROTEIN 23 127 - -
Gabi2540g00003 130 Pfam Auxin responsive protein 16 109 IPR003676 GO:0009733
Gabi2540g00003 130 MobiDBLite consensus disorder prediction 25 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2540g00003 Gabi-Chr2540 20274 20666 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2540g00003 3 109 Calmodulin-binding Proteins AT4G34750 26.126 3.90e-07 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2540g00003 - - gmx:100797158 187.578