Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2540g00002 ATGGCTTTAGCCAGAAGGGGTGTGTGTGCACTGTCGTTTCTTCAATCAAATAGGGAGTTGTTGATGAGAATGACTTTAGACTCCATATGTAAAGTGGGATTTGGTGTGGAAATTGGAACTTTGACTCCCAATTTACCAGACAATTCTTTTGCTCGGGCCTTTGACACTGCAAACATCATAGTAACAATTCGCTTCATTGATCCACTATGGAAAATTAAGAAAATTCTAAATATAGGGTCAGAAGCACAACTTCATAAGAGCATCAAAGTCATTGATGATTTCACTTACTCAGTAATTCGTAGAAGGAAGGCAGAGATAGAGGATGCTAAAAAGAATGGCCAACAAAATCAGATAAAACATGATATATTATCAAGATTCATAGAACTGGGAGAAAGCAATGCATCAGACAAGAGTCTGAGAGATGTTGTCCTGAACTTTGTAATTGCTGGTCTCGACACAACCGCAACAACTGTATCATGGGCCATTTATATGGTAATGACACATGCTCATGTTGCTGACAAACTTTACTTAGAGCTCAAAACTTTTGAGGAGAATCGAGCAAACGAAGAGAATATTTCCTTGCTTCAATGTGACATAGGAGACACTGAATCATTCAATCAAAGAGTAGCTCAATTTTCAAGGTTATTGAACAAAGATTCACTAGAAAAACTGCACTATTTGCATGCAGTCATAACGGAGACCCTAAGATTGTATCCAGCTGTTCCTCAGGATCCTAAGGGCATCTTGGAGGACGATGTCTTGCCAGATGGAACCAAAATAAAAGCAGGTGGCATGGTAACTTATGTTCCATACTCTATGGGAAGGATGGAGTATAACTGGGGCTCTGATGCAGCTTCATTTACACCTGAACGATGGGTCAAGGATGGTATTCTCCAAAATGAATATCCATTCAAATTCACTGCTTTTCAGGCAGGGCCAAAGATATGCCTTGGAAAGGACTCTGCATATCTCCAGATGAGGATGGTATTGGCTATTTTGTGCAGATTTTACAAATTCAACTTGGTGCCTGGTCATTCAGTGAAATACAGGATGATGACTATATTATCAATGCAACATGGCTTGAAGCTTAGAATAGAGAGACGTTCTTGA 1110 0.3955 MALARRGVCALSFLQSNRELLMRMTLDSICKVGFGVEIGTLTPNLPDNSFARAFDTANIIVTIRFIDPLWKIKKILNIGSEAQLHKSIKVIDDFTYSVIRRRKAEIEDAKKNGQQNQIKHDILSRFIELGESNASDKSLRDVVLNFVIAGLDTTATTVSWAIYMVMTHAHVADKLYLELKTFEENRANEENISLLQCDIGDTESFNQRVAQFSRLLNKDSLEKLHYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKIKAGGMVTYVPYSMGRMEYNWGSDAASFTPERWVKDGILQNEYPFKFTAFQAGPKICLGKDSAYLQMRMVLAILCRFYKFNLVPGHSVKYRMMTILSMQHGLKLRIERRS 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2540g00002 369 PRINTS P450 superfamily signature 149 166 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2540g00002 369 PRINTS P450 superfamily signature 316 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2540g00002 369 PRINTS P450 superfamily signature 229 240 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2540g00002 369 PRINTS P450 superfamily signature 307 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2540g00002 369 Coils Coil 172 192 - -
Gabi2540g00002 369 Pfam Cytochrome P450 19 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2540g00002 369 SUPERFAMILY Cytochrome P450 18 368 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2540g00002 369 PRINTS E-class P450 group I signature 138 155 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2540g00002 369 PRINTS E-class P450 group I signature 158 184 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2540g00002 369 PRINTS E-class P450 group I signature 316 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2540g00002 369 PRINTS E-class P450 group I signature 306 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2540g00002 369 PRINTS E-class P450 group I signature 228 246 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2540g00002 369 Gene3D Cytochrome P450 12 369 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2540g00002 369 PANTHER CYTOCHROME P450 19 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2540g00002 Gabi-Chr2540 5052 7254 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2540g00002 18 369 Cytochrome P450 AT1G69500 73.130 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2540g00002 K20495 - gmx:100787802 623.624