Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2539g00003 ATGGGAAATTGTTGCCAATCATCGTTGTTGTTCGGAGTAGGCGAGAGAGAAACTCACCCGGAAAAGGAAAATCAGCAACCCTACCGCAACCACAATCACAACGCTATCTTCTCTCAGAGTCAGAGAGAGACTATGACTATTTTCGTGTCTGTAGCTGATGAACCTTCATCGTTCTCGGAGCTTTCCTTGGCAGACCTGAAAGTCGCGACAAATAATTTCAGCTCGGAGTTTATCGTTTCGGAGAGTGGAGAAAAAGCACCGAACGTGGTTTACAAGGGTCAGCTCCAGAACCCGAACAAGAATCGTCGTTGGATTGCTGTGAAGAAGTTCAGCAAAGCTGCATTGCCTGATCCGAAGCAATTCGTGGAAGAAGCTTCTGGCGTTGGGAAATTGCAGCATCCAAGGCTCGCTAATTTGATCGGTTACTGTTGCGAACATAAACTATTCGATTATGTGAACAAAGATAGACTAGAAGATCATGCGTATCATCCAGTTATGTATGTGAAATATATGCTTCCTTGCAATGTTATTAAAACTGGCCTGGTCATTGATCTGGTCGAGATAAACCCTGATGTGATGTCTTTCCCCAAACAAGCACCTCATAGACTCACAGAGCAAAGAGAAGAGCTCTGA 633 0.4455 MGNCCQSSLLFGVGERETHPEKENQQPYRNHNHNAIFSQSQRETMTIFVSVADEPSSFSELSLADLKVATNNFSSEFIVSESGEKAPNVVYKGQLQNPNKNRRWIAVKKFSKAALPDPKQFVEEASGVGKLQHPRLANLIGYCCEHKLFDYVNKDRLEDHAYHPVMYVKYMLPCNVIKTGLVIDLVEINPDVMSFPKQAPHRLTEQREEL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2539g00003 210 Pfam Protein tyrosine and serine/threonine kinase 89 147 IPR001245 GO:0004672|GO:0006468
Gabi2539g00003 210 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 29 163 IPR045845 GO:0004672|GO:0009742
Gabi2539g00003 210 SUPERFAMILY Protein kinase-like (PK-like) 59 164 IPR011009 -
Gabi2539g00003 210 Gene3D Phosphorylase Kinase; domain 1 48 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2539g00003 Gabi-Chr2539 10237 12400 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2539g00003 49 159 Strubbelig Receptor Gene Family AT4G22130 33.333 1.91e-12 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Gabi2539g00003 PK_Tyr_Ser-Thr 2.9e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2539g00003 K14500 - gmx:100808907 187.578