Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2539g00001 ATGGGAAATTGTTGCCAATCATCGTTGTTGTTCGGAGTAGGCGAGAGAGAAACTCACCCGGAAAAGGAAAATCAGCAACCCTACCGCAACCACAATCACAACGCTATCTTCTCTCAGAGTCAGAGAGAGACTATGACTATTTTCGTGTCTGTAGCTGATGAACCTTCATCGTTCTCGGAGCTCTCCTTGGCAGACCTGAAAGCCGCGACAAATAATTTCAGCTCAGAGTATATCGTTTCGGAGAGTGGAGAAAAAGCACCGAACGTGGTTTACAAGGGTCGGCTCCAGAACCCGAACAAGAATCGTTGTTGGATTGCTGTGAAGAAGTTCAGCAAAGCTGCTTGGCCTGATCTGAAGCAATTCGTGGAAGAAGCTTCTGGCGTTGGGAAATTGCAGCATCCAAGGCTCGCTAATTTGATCGGTTACTGTTGCGGTCTACTATTTCAAGATTCAAGATGGAAGAGTTGGGTGTTCTCCGTGTTTTTAATGTACAGTTCAAAGAGTTATTTACGGTCTTGCCATTAA 525 0.4552 MGNCCQSSLLFGVGERETHPEKENQQPYRNHNHNAIFSQSQRETMTIFVSVADEPSSFSELSLADLKAATNNFSSEYIVSESGEKAPNVVYKGRLQNPNKNRCWIAVKKFSKAAWPDLKQFVEEASGVGKLQHPRLANLIGYCCGLLFQDSRWKSWVFSVFLMYSSKSYLRSCH 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2539g00001 174 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 29 144 IPR045845 GO:0004672|GO:0009742
Gabi2539g00001 174 SUPERFAMILY Protein kinase-like (PK-like) 59 144 IPR011009 -
Gabi2539g00001 174 Gene3D Phosphorylase Kinase; domain 1 48 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2539g00001 Gabi-Chr2539 6104 6628 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2539g00001 21 143 Receptor kinase-like Gene Family AT5G07280 29.268 2.55e-10 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Gabi2539g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2539g00001 K14500 - gmx:100808907 186.037