Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2537g00034 ATGAACAGCGACGGAATGGGAATATATCTCAGCACACCCAAAACTGAGAAGTTTTCTGAAGATGGTGAAAATGGCCATCTTAGATATGGTTTGTCATCCATGCAAGGGTGGCGTGCAACAATGGAAGATGCACATGCTGCATATACTGATCTGGATAAGTCCACTTCGTTTTTTGGTGTTTTTGATGGTCATGGAGGTAAGGTGGTTGCAAAGTTTTGTGCTAAGTTTCTTCACCAACAGGTCCTCAAAAATGAAGCATACGCAGCTGGAGATATAGGAACCGCTCTTCAGAAAGCATTTTTAAGAATGGATGAAATGATGCGTGGTCAAAGGGGATGGAGGGAATTATCAATCTTGGGGGATAAGATAAACAAGTTTACTGGGATGATTGAAGGGTTGATTTGGTCTCCACGAAGCAGTGATGGTAATGACCAAGTTGATGATTGGGCTTTTGAGGAGGGGCCTCATTCTGATTTTTCCGGACCAACTTCAGGAAGCACTGCCTGTGTTGCAGTTATTAGAAACAACCAACTTGTTGTTGCTAATGCTGGTGATTCACGTTGTGTAATATCTCGGAAGGGTCAGGCATACAATTTGTCTAGAGACCACAAACCTGATCTTGAGATTGAGAAGGAAAGAATCTTAAAAGCTGGTGGTTTTATTCATGCAGGACGAGTTAATGGCAGTCTAAATCTTGCAAGAGCTATTGGTGACATGGAATTCAAACAGAATAAATTTCTTCCTGCTGAAAAACAAATTGTAACTGCCAATCCAGATATAAACACTGTTGAGCTTTGTGATGAAGATGAATTTATTGTGATAGCTTGTGATGGCATATGGGATTGCATGTCAAGCCAACAAGTGGTAGACTTTGTTCATGAACAATTGCGCTTAGAAACGAAGCTCTCTGCAGTTTGTGAAAGAGTACTTGACCGTTGTTTGGCACCATCAACTGCTAGTGGTGAGGGATGTGATAACATGACCATGATCTTGGTGCAGTTCAAAAAACCTGCTCAGTCCAGTTCACCAGTAGAAGAGCAATCCTCTTCAAACGGGCAAGCTGAATCAGAACCAAAACTGGAGAGAAGTGAAAGTTAA 1098 0.4171 MNSDGMGIYLSTPKTEKFSEDGENGHLRYGLSSMQGWRATMEDAHAAYTDLDKSTSFFGVFDGHGGKVVAKFCAKFLHQQVLKNEAYAAGDIGTALQKAFLRMDEMMRGQRGWRELSILGDKINKFTGMIEGLIWSPRSSDGNDQVDDWAFEEGPHSDFSGPTSGSTACVAVIRNNQLVVANAGDSRCVISRKGQAYNLSRDHKPDLEIEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPAEKQIVTANPDINTVELCDEDEFIVIACDGIWDCMSSQQVVDFVHEQLRLETKLSAVCERVLDRCLAPSTASGEGCDNMTMILVQFKKPAQSSSPVEEQSSSNGQAESEPKLERSES 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2537g00034 365 SMART PP2C_4 18 332 IPR001932 -
Gabi2537g00034 365 Pfam Protein phosphatase 2C 160 319 IPR001932 -
Gabi2537g00034 365 Pfam Protein phosphatase 2C 28 109 IPR001932 -
Gabi2537g00034 365 SMART PP2C_SIG_2 33 334 IPR001932 -
Gabi2537g00034 365 Gene3D - 5 335 IPR036457 -
Gabi2537g00034 365 MobiDBLite consensus disorder prediction 336 365 - -
Gabi2537g00034 365 ProSiteProfiles PPM-type phosphatase domain profile. 28 334 IPR001932 -
Gabi2537g00034 365 PANTHER PROTEIN PHOSPHATASE 2C 23 333 IPR015655 GO:0004722|GO:0006470
Gabi2537g00034 365 MobiDBLite consensus disorder prediction 336 356 - -
Gabi2537g00034 365 ProSitePatterns PPM-type phosphatase domain signature. 57 65 IPR000222 GO:0043169
Gabi2537g00034 365 SUPERFAMILY PP2C-like 8 336 IPR036457 -
Gabi2537g00034 365 CDD PP2Cc 28 334 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2537g00034 Gabi-Chr2537 298143 305379 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2537g00034 6 346 PP2C-type Phosphatase Gene Family AT2G25070 77.419 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2537g00034 K17499 - qsa:O6P43_015776 654.055