Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2537g00023 ATGGATGAAAAGGTGGAAACTCTTCAAGCGGAGCTGCAACATGCGAAGGAGGAGAATCATACTCTAAGACTCATGCTGGAAATTCTGAGCAGCAAATACGAAATGCTTCAGTCCCATTTTCAAGAAATCAATAATGCAGAGCAGGGGAGCATAAACTCAAATCAGTGGGAACGACCCGAGTTTCCCAAAGCACAAAAGCCATCACAAATATTTGTCAGAACCCACCCCAAGGACAATAGTTTGATGGTAATTGATGGCTATCAGTGGAGGAAGTATGGACAGAAGGTCACCAAAGACAATTCTTCGCCTAGAGCTTACTTCAAATGCTCCATGGCTCCCAGCTGCCCAGTCAAAAAAAAGGTGCAAAGAAGCATACATGATAGGTCTATACTTGTGGCAACTTATGAAGGAGGGCACAACCATGCTGTTCTTCATGACTTACTCAGGCCATCATCATCGTCCTCACACAAATGTTCAATGATGGCGAATGATTTACCTATGTCAATCCTACCTAACCACAAAGATAAGATGAACATTGACCTTGCTCTTTGTGGTTGGGCTCAAACAGATACAAGACTATGTGAAGATCTTAAGCAACGGAGCGACCACGACATCAACAGCAAAAATGAAGAATATTAA 639 0.4272 MDEKVETLQAELQHAKEENHTLRLMLEILSSKYEMLQSHFQEINNAEQGSINSNQWERPEFPKAQKPSQIFVRTHPKDNSLMVIDGYQWRKYGQKVTKDNSSPRAYFKCSMAPSCPVKKKVQRSIHDRSILVATYEGGHNHAVLHDLLRPSSSSSHKCSMMANDLPMSILPNHKDKMNIDLALCGWAQTDTRLCEDLKQRSDHDINSKNEEY 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2537g00023 212 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 5 51 IPR044810 GO:0003700
Gabi2537g00023 212 ProSiteProfiles WRKY domain profile. 78 144 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2537g00023 212 SMART WRKY_cls 83 143 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2537g00023 212 Coils Coil 5 32 - -
Gabi2537g00023 212 Gene3D WRKY domain 68 143 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2537g00023 212 Pfam WRKY DNA -binding domain 85 141 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2537g00023 212 SUPERFAMILY WRKY DNA-binding domain 80 142 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2537g00023 Gabi-Chr2537 233280 234907 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2537g00023 2 141 WRKY Transcription Factor Family AT1G80840 39.548 1.41e-36 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi2537g00023 WRKY 1.8e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2537g00023 - - gmx:121175041 261.151