Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2537g00022 ATGGAACCAACGTGCGTCGATACTTCTCTCAACCTTAACGTTATTCCTTCTCAACACATGAATGTCGCGGCTGAGATTTTAGTTGAAGAGTTGCAGCGTCTAAGTTGTGAGAACAAGAGGTTAACTGAGACGCTGAACCACATGTGGGAGAACTATCTTGCTTTGCAAAAGCATTTGAGTGAATTCAGCCAACTGAGGAACACAAATTTTGAAGAAGAAGCGACACCATCGCGGAAGAGAAAGGTCGAGAGTGAGAATGGTATCAATCTGTTTGGTAATGAGTGCGAGGAGGAGACATTATTCAAAAGGCCTAAACATAACACCTCGCCAAAGGTTTCCAAGGTTCTTGTTCGAACAGAAGCATCTGATACCAGTTTATATGTGAGCGATGGATATCATTGGAGAAAATATGGTCAGAAAGTCACTAGAGATAACCCCTCTCCTAGGGCTTACTTTAAGTGCTCCTTTGCCCCAAGCTGCCCAGTGAAGAAGAAGGTGCAAAGAAGTGTAGAAGACCAAAGTGTATTGGTGGCAACTTACGAAGGAGAGCACAACCATGCACATCAACAAGCGGAAATATCATTGAGTTCAAGCCAAAGTGAAACCATTGAAGGTTCAGTTCCTGCTTCCTCACCCTCACTTTCACCCATCATGAATCGTAGTGCAGCTGGTCCAACGGTAACGCTTGACTTGGTCCAGTCAAGATCGGTTGATAATGCGCAAAAGTCATCTATCCACCAACAGTTTTTAGTTCAACAAATGGCTACTTCTTTGACAAGAGATCCTAATTTCACAGCAGCACTTGCTACTGCCATTTCAGGAACATTTCTAAACCACACTTCTACGGAAGAACGGTGA 858 0.4371 MEPTCVDTSLNLNVIPSQHMNVAAEILVEELQRLSCENKRLTETLNHMWENYLALQKHLSEFSQLRNTNFEEEATPSRKRKVESENGINLFGNECEEETLFKRPKHNTSPKVSKVLVRTEASDTSLYVSDGYHWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHAHQQAEISLSSSQSETIEGSVPASSPSLSPIMNRSAAGPTVTLDLVQSRSVDNAQKSSIHQQFLVQQMATSLTRDPNFTAALATAISGTFLNHTSTEER 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2537g00022 285 SMART WRKY_cls 128 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2537g00022 285 MobiDBLite consensus disorder prediction 193 220 - -
Gabi2537g00022 285 ProSiteProfiles WRKY domain profile. 123 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2537g00022 285 FunFam WRKY transcription factor 40 113 190 - -
Gabi2537g00022 285 Gene3D WRKY domain 111 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2537g00022 285 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 24 276 IPR044810 GO:0003700
Gabi2537g00022 285 Pfam WRKY DNA -binding domain 130 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2537g00022 285 SUPERFAMILY WRKY DNA-binding domain 125 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2537g00022 285 Coils Coil 24 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2537g00022 Gabi-Chr2537 220956 222859 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2537g00022 6 284 WRKY Transcription Factor Family AT1G80840 47.000 1.00e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi2537g00022 WRKY 4.8e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2537g00022 - - gmx:100127373 397.897