Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2537g00011 ATGGCAAAGTGTGAACTGAACAACGTTGGATCAATCGTTCTCGACCACCGCCACCCTGCCAAGAATGAAACCGCCGGCGGCGGCCACTTCCGTCTCTGGAATTCCCGCTCCGTCTCTTCGTTTCGCCGCATAATTATCGACGCCGTAAGCTGCGGCGGCACTTCTCGGCACCGGTGTCACCAGCGCCACAACAACGACGATGTCGTTAGCTCCGCCCCCTCGACGGCGAGCTTGTCCTCCGGGGAGAAGCAGCCAGTGCAAGAGGAGAGGTCGGAGAAGCTATCGGATCTTCTGAACGCAACGGAGTGTGAAACGGAGGGGGAAGCGAAGAAGAAGGAAGAGGCATTGACGGAGATGAAGCGAGTGGTGAAGGAGTTGCTGGGAGAGGACTTTTTGAAGCAGCGAATGGCAGCGGCGAGCGTGAGGCTACTGACGAAGGAAGGCTCGGAAGCGAGAGGGACATTCGCAATGCTTGGAGCAATTCCACCACTCGTTGGAATGCTTGATTTGGAAGACGTTCACTCTCAGATCGCATCGCTCTATGCGTTACTCAATCTCGGGATCGGAAACGATGCGAATAAAGCAGCTATTGTCAAAGTTGGTGCTGTTCACAAGATGCTCAAGCTCATTGAATCGCCGGATGTTGCAGATTCATCGGTATCTGAAGCAATTGTTGCCAACTTCCTTGGATTGAGTGCTTTGGATTCGAATAAACCTATAATTGGATCCTCGGGTGCAATACCATTCCTAGTTAGAACCCTTCAAAATTTATATGATAATAAAAGTAGCTCCCAAGTCAAACAAGATGCTCTCCGAGCGCTGTATAATCTTTCAATCTTTCAGACCAACATTTCATTCGTTTTGGAAACTGAGTTGGTCTCATTTCTGATAAAAGCAATAGGAGACATGGAAGCAAGTGAAAGAATCCTCTCAATTCTAAGCAATTTGGTGTCAACTCCAGAGGGAAGAAAAGCTATCAGTGGTGTGAGGGATGCAATCCCAATTCTGGTGGATGTATTGAATTGGACAGATTCCCCGGAATGCCAAGAGAAGGCATCATACATTTTGATGATTATGGCACACAAAGCCTATGGTGACAAGCAAGCCATGATTGAGGCAGGGATTGTGTCGTCACTACTTGAGTTGACGCTTCTTGGTACTACTTTGGCACAGAAGAGGGCCTCAAGGATATTGGAATGTTTGAGGATAGACAAAGGGAAGCAGGTTTCGGGGAGATATGGTAAAAACTTAGGTGCAACTGTCTCTGCACCTATTTGTGGTTCTTCATCATCCTTTACAAAGACAGATGGAGGAGGCAAAGAGTATTTGGAGGAAGAGGAAGATATGATGAGTGAGGAAAAGAAAGCAGTGAAGCAATTAGTCCAGCAGAGTTTGCAGAACAACATGATGAAAATTGTGAAGAGGGCAAACTTTCGTCAAGAATTTGTTCCATCCGAGCATTTTACTTCACTGACTTCAAGTTCGACTTCAAAGAGCCTTCCATTTTAA 1509 0.4718 MAKCELNNVGSIVLDHRHPAKNETAGGGHFRLWNSRSVSSFRRIIIDAVSCGGTSRHRCHQRHNNDDVVSSAPSTASLSSGEKQPVQEERSEKLSDLLNATECETEGEAKKKEEALTEMKRVVKELLGEDFLKQRMAAASVRLLTKEGSEARGTFAMLGAIPPLVGMLDLEDVHSQIASLYALLNLGIGNDANKAAIVKVGAVHKMLKLIESPDVADSSVSEAIVANFLGLSALDSNKPIIGSSGAIPFLVRTLQNLYDNKSSSQVKQDALRALYNLSIFQTNISFVLETELVSFLIKAIGDMEASERILSILSNLVSTPEGRKAISGVRDAIPILVDVLNWTDSPECQEKASYILMIMAHKAYGDKQAMIEAGIVSSLLELTLLGTTLAQKRASRILECLRIDKGKQVSGRYGKNLGATVSAPICGSSSSFTKTDGGGKEYLEEEEDMMSEEKKAVKQLVQQSLQNNMMKIVKRANFRQEFVPSEHFTSLTSSSTSKSLPF 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2537g00011 502 Coils Coil 443 463 - -
Gabi2537g00011 502 MobiDBLite consensus disorder prediction 66 84 - -
Gabi2537g00011 502 Coils Coil 109 129 - -
Gabi2537g00011 502 Gene3D - 260 412 IPR011989 -
Gabi2537g00011 502 SUPERFAMILY ARM repeat 118 401 IPR016024 -
Gabi2537g00011 502 MobiDBLite consensus disorder prediction 54 94 - -
Gabi2537g00011 502 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 24 502 - -
Gabi2537g00011 502 SMART arm_5 190 233 IPR000225 GO:0005515
Gabi2537g00011 502 SMART arm_5 280 318 IPR000225 GO:0005515
Gabi2537g00011 502 SMART arm_5 319 361 IPR000225 GO:0005515
Gabi2537g00011 502 SMART arm_5 148 188 IPR000225 GO:0005515
Gabi2537g00011 502 SMART arm_5 234 279 IPR000225 GO:0005515
Gabi2537g00011 502 Gene3D - 83 259 IPR011989 -
Gabi2537g00011 502 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 245 278 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2537g00011 Gabi-Chr2537 86237 88154 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2537g00011 134 399 U-box Gene Family AT3G46510 36.531 1.43e-33 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2537g00011 - - gmx:100818576 626.706